Non-Coding RNA Search

Ss1.1-Pig1-28K09.5

Sequence:


               
               TTTTATTTATTTGCTGATGGTCAGTTACCTAGCTTCATAAAATGAACTAATTTGGTCCTG
GACACCACATTCCTATTGTTTTTGTCATAATGCAGAAATAAAATATAAATGCATTCCTAT
GAACACAACTTCCTGGAGCTGCATGAATCTTGAGCTCTCTGTTTGAGCCTATTTCATTTC
TTATATCTGAAATTACTAACTTTAGCCATTGGAACACAGAACATTTTAAATGGATTACAC
TTTCATAGTAAATCATCCTTGTTTTCTCATCCATTCTCTCAGCTGAAAAAGAAAATATGA
AAGTGAGGCCAAATGAATATATTATTGAATTCTGAGTTTATCTCACTTCCAGATCTTGCA
ATGATCAGGTTGTAAGATTTCTACAAACCTTGGTAATATTTTAGACTTAGATACAGAAAT
TAATATGTATGTATTTCTTGTATTTGTACAATGGAGCCAGAAGAAGGACTCATGTATATA
GAACTGTATTTATTTGCATGTGTACTTCAAAGTGAAATCTTTAACAAATTTAACAGTATA
TATACTTGTGCTGCTGATAAAACACACCAGTCAAACCTGCCTACCAGGTGGATTTGAAAT
CTGAATTTACTTTTACATGCACACATAAATTACTATTTCAGTGCAACCAGGTGCTATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTATTTATTTGCTGATGGTCAGTTACCTAGCTTCATAAAATGAACTAATTTGGTCCTG
GACACCACATTCCTATTGTTTTTGTCATAATGCAGAAATAAAATATAAATGCATTCCTAT
GAACACAACTTCCTGGAGCTGCATGAATCTTGAGCTCTCTGTTTGAGCCTATTTCATTTC
TTATATCTGAAATTACTAACTTTAGCCATTGGAACACAGAACATTTTAAATGGATTACAC
TTTCATAGTAAATCATCCTTGTTTTCTCATCCATTCTCTCAGCTGAAAAAGAAAATATGA
AAGTGAGGCCAAATGAATATATTATTGAATTCTGAGTTTATCTCACTTCCAGATCTTGCA
ATGATCAGGTTGTAAGATTTCTACAAACCTTGGTAATATTTTAGACTTAGATACAGAAAT
TAATATGTATGTATTTCTTGTATTTGTACAATGGAGCCAGAAGAAGGACTCATGTATATA
GAACTGTATTTATTTGCATGTGTACTTCAAAGTGAAATCTTTAACAAATTTAACAGTATA
TATACTTGTGCTGCTGATAAAACACACCAGTCAAACCTGCCTACCAGGTGGATTTGAAAT
CTGAATTTACTTTTACATGCACACATAAATTACTATTTCAGTGCAACCAGGTGCTATTTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-659, gnl|bosTau2|chr8 (12143008-12143672)
               

               
               1-659, gnl|Hg17|chr9 (21992577-21993243)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr8 (12143008-12143672)
               

               
               1-659, gnl|Hg17|chr9 (21992577-21993243)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)
               

               
               jej (0.0989218)

	1-659, gnl\|bosTau2\|chr8 (12143008-12143672)
	1-659, gnl\|Hg17\|chr9 (21992577-21993243)