Ss1.1-Pig1-28K24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTCTTCCCCAGGTACCGGCCCAGGGGTTCCTGCAGGCCCCTTTCCCAGTGACTTCCCAC AGAAGACAAGAGGCCAAACCACAGCGTGAGTGAAGACCAGACAGACCAGCTAAAGCCCAG CTTCAGCGCTGTGTGACGCGGAGCAGCATCACCATCTCATCCAGCAGAGCAGCGGGTTCA GAGCCTTGCTTCTCACAGTGTTTATCATCAGACACTGTCCCTGCCCATGTTTGAGAGTCC CAGGAAAAGCCCATTAGTAGATCGGCTTGGGTTACGTTGTCACATTGGGCTGATCAACTG CGCAAGTAGCCGCTGACTCCCAGGGCCACCATGAACTGGGGGGTCTTCGAGGGGCTCCTG AGCGGAGTGAACAAGTACTCCACGGCCTTCGGGCGCGTCTGGCTGTCCCTGGTCTTCATC TTCCGCTTGCTGGTGTACCTGGTGACCGCCGAGCGCGTGTGGAGCGATGACCACAAGGAC TTCAGCTGCGACACCCGCCAGCCGGGCTGCCCCAATGTCTGCTACGACGAGTTCTTCCCC GTGTCCCACGTGCGCCTCTGGGCCCTGCAGCTCATCCTGGTCACGTGCCCCTCGCTGCTC GTGGTCATGCACGTGGCCTACCGCGAGGCCCGGGAGAAGAAGCACCGAGAGAGAGCCGGG AAGGACGGCGGGCGCCTCTACCTGGACCCCGGCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTCTTCCCCAGGTACCGGCCCAGGGGTTCCTGCAGGCCCCTTTCCCAGTGACTTCCCAC AGAAGACAAGAGGCCAAACCACAGCGTGAGTGAAGACCAGACAGACCAGCTAAAGCCCAG CTTCAGCGCTGTGTGACGCGGAGCAGCATCACCATCTCATCCAGCAGAGCAGCGGGTTCA GAGCCTTGCTTCTCACAGTGTTTATCATCAGACACTGTCCCTGCCCATGTTTGAGAGTCC CAGGAAAAGCCCATTAGTAGATCGGCTTGGGTTACGTTGTCACATTGGGCTGATCAACTG CGCAAGTAGCCGCTGACTCCCAGGGCCACCATGAACTGGGGGGTCTTCGAGGGGCTCCTG AGCGGAGTGAACAAGTACTCCACGGCCTTCGGGCGCGTCTGGCTGTCCCTGGTCTTCATC TTCCGCTTGCTGGTGTACCTGGTGACCGCCGAGCGCGTGTGGAGCGATGACCACAAGGAC TTCAGCTGCGACACCCGCCAGCCGGGCTGCCCCAATGTCTGCTACGACGAGTTCTTCCCC GTGTCCCACGTGCGCCTCTGGGCCCTGCAGCTCATCCTGGTCACGTGCCCCTCGCTGCTC GTGGTCATGCACGTGGCCTACCGCGAGGCCCGGGAGAAGAAGCACCGAGAGAGAGCCGGG AAGGACGGCGGGCGCCTCTACCTGGACCCCGGCAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 2-173, gnl|bosTau2|chr11 (42107797-42107976) | |
| 319-696, gnl|bosTau2|chr3 (78132795-78132420) | |
| 319-696, gnl|Hg17|chr1 (34919447-34919822) | |
| 319-696, gnl|Mm7|chr4 (126771394-126771019) | |
| 328-643, gnl|bosTau2|chr12 (20140039-20140351) | |
| 328-643, gnl|canFam2|chr25 (20940676-20940048) | |
| 328-643, gnl|danRer3|chr17 (35056431-35057065) | |
| 328-643, gnl|dasNov1|scaffold_19229 (5169-5797) | |
| 328-643, gnl|echTel1|scaffold_293168 (3438-2806) | |
| 328-643, gnl|fr1|chrUn (250039006-250039640) | |
| 328-643, gnl|galGal2|chr1 (170932512-170931896) | |
| 328-643, gnl|hg17|chr13 (19661093-19661721) | |
| 328-643, gnl|Hg17|chr13 (19661723-19661411) | |
| 328-643, gnl|loxAfr1|scaffold_37948 (9597-10225) | |
| 328-643, gnl|mm7|chr14 (51967841-51968469) | |
| 328-643, gnl|Mm7|chr14 (51968471-51968159) | |
| 328-643, gnl|monDom2|scaffold_15 (27843714-27844342) | |
| 328-643, gnl|oryCun1|scaffold_81321 (8953-8325) | |
| 328-643, gnl|panTro1|chr14 (18553301-18553929) | |
| 328-643, gnl|rheMac2|chr17 (1322005-1321377) | |
| 328-643, gnl|rn3|chr15 (36170742-36171370) | |
| 328-643, gnl|tetNig1|chr2 (17705549-17704916) | |
| 328-643, gnl|xenTro1|scaffold_327 (932639-933264) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-173, gnl|bosTau2|chr11 (42107797-42107976) | |
| 319-696, gnl|bosTau2|chr3 (78132795-78132420) | |
| 319-696, gnl|Hg17|chr1 (34919447-34919822) | |
| 319-696, gnl|Mm7|chr4 (126771394-126771019) | |
| 328-643, gnl|bosTau2|chr12 (20140039-20140351) | |
| 328-643, gnl|canFam2|chr25 (20940676-20940048) | |
| 328-643, gnl|danRer3|chr17 (35056431-35057065) | |
| 328-643, gnl|dasNov1|scaffold_19229 (5169-5797) | |
| 328-643, gnl|echTel1|scaffold_293168 (3438-2806) | |
| 328-643, gnl|fr1|chrUn (250039006-250039640) | |
| 328-643, gnl|galGal2|chr1 (170932512-170931896) | |
| 328-643, gnl|hg17|chr13 (19661093-19661721) | |
| 328-643, gnl|Hg17|chr13 (19661723-19661411) | |
| 328-643, gnl|loxAfr1|scaffold_37948 (9597-10225) | |
| 328-643, gnl|mm7|chr14 (51967841-51968469) | |
| 328-643, gnl|Mm7|chr14 (51968471-51968159) | |
| 328-643, gnl|monDom2|scaffold_15 (27843714-27844342) | |
| 328-643, gnl|oryCun1|scaffold_81321 (8953-8325) | |
| 328-643, gnl|panTro1|chr14 (18553301-18553929) | |
| 328-643, gnl|rheMac2|chr17 (1322005-1321377) | |
| 328-643, gnl|rn3|chr15 (36170742-36171370) | |
| 328-643, gnl|tetNig1|chr2 (17705549-17704916) | |
| 328-643, gnl|xenTro1|scaffold_327 (932639-933264) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.36785) |