Ss1.1-Pig1-28M15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCAGGAAAAGCTGTGCTTGGAATTCCAGGATGCCCAGGCGTCTTCAAGAAACTCAAAA AAGATCCCTCTGGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAAGCAGCTGATGCAGCGG TCAATGAGTGAGTCGGACACAGACTCCAACAACTCTGAGGACCCCAAGGGCACACCCGTG AGAAAGGCTGACAGGCCCAGACCTCAGCCCATCGTGGAAAGCGTGGAGAGTGTGGACAGT GCCGAAAGCTTACACTTGATGATAAAGAAACACACATTGGCATCGGGACGCAGGTTTCCC TTTGGTATCAAGGCCTCCAAATCTCTGGACGGCCATAGCCCATCTCCCACCTCAGAGAGC AGCGAGCCAGACCTGGAATCCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCAGGAAAAGCTGTGCTTGGAATTCCAGGATGCCCAGGCGTCTTCAAGAAACTCAAAA AAGATCCCTCTGGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAAGCAGCTGATGCAGCGG TCAATGAGTGAGTCGGACACAGACTCCAACAACTCTGAGGACCCCAAGGGCACACCCGTG AGAAAGGCTGACAGGCCCAGACCTCAGCCCATCGTGGAAAGCGTGGAGAGTGTGGACAGT GCCGAAAGCTTACACTTGATGATAAAGAAACACACATTGGCATCGGGACGCAGGTTTCCC TTTGGTATCAAGGCCTCCAAATCTCTGGACGGCCATAGCCCATCTCCCACCTCAGAGAGC AGCGAGCCAGACCTGGAATCCCAG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 4-162, - strand, RNAz p=0.847186 | |
| 243-359, - strand, RNAz p=0.529998 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 4-162, - strand, RNAz p=0.847186 | |
| 243-359, - strand, RNAz p=0.529998 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 4-384, gnl|bosTau2|chr25 (17151718-17152098) | |
| 4-384, gnl|Hg17|chr5 (121814344-121814727) | |
| 4-384, gnl|Mm7|chr18 (53287404-53287784) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-384, gnl|bosTau2|chr25 (17151718-17152098) | |
| 4-384, gnl|Hg17|chr5 (121814344-121814727) | |
| 4-384, gnl|Mm7|chr18 (53287404-53287784) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| pla (0.133672) | |
| ecc (0.115035) |