Ss1.1-Pig1-30J03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAGTGGACGCTGCTGTGTTCTGCCTCTGCCTAGACGACTTCCCGGTGAAGGACCTCAT CCACTTGTCCCACAGCATGCTGCACGGCGACGGCACAAACCGCTGGTTTGACAAGTCCTT CAACCTCATCCTTGCCGAGGATGGCACTGCGGCTGTCCATTTTGAGCACGCTTGGGGCGA CGGGGTTGCCGTGCTCAGGTTCTTAAATGAAGTGTTTAAAGACAGCACGCAGGCCCCTGC CGTCACTCCGCAGAGCCCGCCCGCCCGCACTGACTCGTCCCGCGCGGTGCAGAAACTCAG CTTCAAGCTGGACGACGCCGTGAAGGCGGGCATCAGCGCCGCGAAGGCAAAGTTCGATGC CACCGTGAAAACCCTCACCATTGACTGCATCCAGTTCCAGAGAGGAGGCAAAGAATTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAGTGGACGCTGCTGTGTTCTGCCTCTGCCTAGACGACTTCCCGGTGAAGGACCTCAT CCACTTGTCCCACAGCATGCTGCACGGCGACGGCACAAACCGCTGGTTTGACAAGTCCTT CAACCTCATCCTTGCCGAGGATGGCACTGCGGCTGTCCATTTTGAGCACGCTTGGGGCGA CGGGGTTGCCGTGCTCAGGTTCTTAAATGAAGTGTTTAAAGACAGCACGCAGGCCCCTGC CGTCACTCCGCAGAGCCCGCCCGCCCGCACTGACTCGTCCCGCGCGGTGCAGAAACTCAG CTTCAAGCTGGACGACGCCGTGAAGGCGGGCATCAGCGCCGCGAAGGCAAAGTTCGATGC CACCGTGAAAACCCTCACCATTGACTGCATCCAGTTCCAGAGAGGAGGCAAAGAATTCCT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 40-239, + strand, RNAz p=0.891814 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 40-239, + strand, RNAz p=0.891814 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-420, gnl|bosTau2|chr12 (48414048-48413629) | |
| 1-420, gnl|Hg17|chr1 (53388315-53388734) | |
| 1-420, gnl|Mm7|chr4 (107284057-107283638) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-420, gnl|bosTau2|chr12 (48414048-48413629) | |
| 1-420, gnl|Hg17|chr1 (53388315-53388734) | |
| 1-420, gnl|Mm7|chr4 (107284057-107283638) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |