Non-Coding RNA Search

Ss1.1-Pig1-37G23.5

Sequence:


               
               CATTTTTTATGTTTCTGTAAATTTAGAGTAGAGTGGCAAATATTTAAAAAGAAAAAAAGA
GACTGAAGCATTTACAGAAAACGGCAAGATTGCACATGTATAAAGTTTACATAAAGTTTT
TTTTAAGTTATTGGAGTAAAAAATATATTCACTGTTGCTTTAAATTGTCTTTTAGCCAAT
CTTTGTGTTTAATACACTTAAAAAAATCTGGAGTTCTGTCTTCAAGGCCCACATCCTTAA
ATACTGTGCATAAATTATTTTGGTGTTTTGCCTGTATATTGCCCCAGACGAATGTGGATG
TACACACTTGTTTGTGTATGTGTATATATGCAAGTCTGTTTAAATCACCAGTTATATTGA
CTAAGTGGACATAAATTGCAAATTGCATGTTGTTATCTGGGTTGGATGTATACTTTTTGT
GTCTCTGACATGATACATTTTCATTAATGGTTTAAATCACTGATAAAGATGAATTGAGTG
TTAAATACTTACATGTTTATCACCTCTAAATAAAAGCTGCTTATTTGGAATGTTACTATT
TAAAAGAAGAAAACTTTCTAGTACCAAAGAAAACTCTTTGAAAGAGCTATAATAACATAG
CTAATGAGATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTTTTATGTTTCTGTAAATTTAGAGTAGAGTGGCAAATATTTAAAAAGAAAAAAAGA
GACTGAAGCATTTACAGAAAACGGCAAGATTGCACATGTATAAAGTTTACATAAAGTTTT
TTTTAAGTTATTGGAGTAAAAAATATATTCACTGTTGCTTTAAATTGTCTTTTAGCCAAT
CTTTGTGTTTAATACACTTAAAAAAATCTGGAGTTCTGTCTTCAAGGCCCACATCCTTAA
ATACTGTGCATAAATTATTTTGGTGTTTTGCCTGTATATTGCCCCAGACGAATGTGGATG
TACACACTTGTTTGTGTATGTGTATATATGCAAGTCTGTTTAAATCACCAGTTATATTGA
CTAAGTGGACATAAATTGCAAATTGCATGTTGTTATCTGGGTTGGATGTATACTTTTTGT
GTCTCTGACATGATACATTTTCATTAATGGTTTAAATCACTGATAAAGATGAATTGAGTG
TTAAATACTTACATGTTTATCACCTCTAAATAAAAGCTGCTTATTTGGAATGTTACTATT
TAAAAGAAGAAAACTTTCTAGTACCAAAGAAAACTCTTTGAAAGAGCTATAATAACATAG
CTAATGAGATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-612, gnl|bosTau2|chr14 (49877488-49878071)
               

               
               4-612, gnl|Hg17|chr8 (82876263-82875670)
               

               
               4-612, gnl|Mm7|chr3 (10427288-10426726)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-612, gnl|bosTau2|chr14 (49877488-49878071)
               

               
               4-612, gnl|Hg17|chr8 (82876263-82875670)
               

               
               4-612, gnl|Mm7|chr3 (10427288-10426726)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tbr (0.154178)
               

               
               bfe (0.149858)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               bfe (0.149858)

	4-612, gnl\|bosTau2\|chr14 (49877488-49878071)
	4-612, gnl\|Hg17\|chr8 (82876263-82875670)
	4-612, gnl\|Mm7\|chr3 (10427288-10426726)