Non-Coding RNA Search

Ss1.1-Pig1-38B10.5.5

Sequence:


               
               TATGCCACAGCCACAGCAGCATGGGCTTTGAGCTGTGTCTGTGACCTACATCACAGCTCA
TGGCAACACCAGATCCTTAACCCACTGAGTGAGGCCAGGGAACGAACCTAAATCCTCATG
GATCCTAGTCAGGTTAGTTAACCACTGAGCCACAGAGAACTCCCCTTTTTTTAAAATTTA
ATTTCTGCTGTACTCATTTTCATTGCTAGATACTTTCAACAGCACTGATTCATTCAAGGT
CTTGTTTTAGGACGTCTACTTTTTTTTTTTTTTTTTTTGGTCTGTGCCTGCATTATGCAG
AAGTTCCCAGGCCAGGAATCAAAGCCACACCACAGCAGCATTCTGAGCCACGGCAGTGAC
AATGCTGGATCCTTAACCTGCTGAGCCATCAGGGAACTCCTACTTTAGAATTTTTTAAAT
TAACTATGTTATAAATTATTCCACATATTGAAAATATATAATTTCTTCATTTAAATCCTT
TGTAAATAGTAAGTTTGTTTGATGGCTCCTTTTTACATGAAGTAAAAAGCAAATTACTGA
GCTATGTTAGGTTATATATAACATCAGACGATTGAAGCCTCAGATGGACTATAGGCTTCA
GATTCAGTTTCTGTTGCCCTTCACTGAGGTAACTTCATTACTCATTTCCATGTCAATATT
TGATTGTTTATTTTTGGTCATTTCCATTTATCAAAGGGAATTTGGAATGTGTTGAATAAT
ATCAGGCAGTTGTTCAAGCAAGAATACATCAAACTTACTTGCAAGTTCAGAGGCTGTCAT
GGGAAATTAGTATTTTTGAGCCCCTAACATGGTCCCTATCCTATGCTAAACACTTTGATA
TTTAATTCCCAAATCCCTTAAATATGGGATGATGTTATCTCTGCAGAAGTAAAGATGGTG
GGATAGATCTTAATGGAAAAAGAGAAATGTATATATACCATGCTATACTTCCTAGACAGC
AGAGAGTGGGGGTTCACAAATTTGTCTGAATATCCTAGCAACTAACACAAGGAACCATCC
CATTAATTACATAATTTGTTGTTTCTAAGAGAGCTTCAACATCCTAAGAAAAGCATAATT
ATTTATTAAGGTGGGTGAGATTTTTTTCATAACAAATACTTTGCCTAAAATAAGCAGTAT
TCCCAACATTTATGTTGGTACTATATATATAGAACCCTGAATTTCCTGGCTTAATGAATT
TCCATTATCCAGATTAATCCAAAGGAAAACTTTTGAAATATCAAAACAGAATGGATAAAA
TATAAATCAAGGGGAAGGGTATTTTTCTAAGTATTAAATTGCAATTTTCTGGTGTGTACC
CAGACTTTAAATATTGTTTGCTGGTTCCATTAGTAACTCATGCTTTACTTTTGTTGGATT
GCAATTTAGAGGGTTAAGTCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGCCACAGCCACAGCAGCATGGGCTTTGAGCTGTGTCTGTGACCTACATCACAGCTCA
TGGCAACACCAGATCCTTAACCCACTGAGTGAGGCCAGGGAACGAACCTAAATCCTCATG
GATCCTAGTCAGGTTAGTTAACCACTGAGCCACAGAGAACTCCCCTTTTTTTAAAATTTA
ATTTCTGCTGTACTCATTTTCATTGCTAGATACTTTCAACAGCACTGATTCATTCAAGGT
CTTGTTTTAGGACGTCTACTTTTTTTTTTTTTTTTTTTGGTCTGTGCCTGCATTATGCAG
AAGTTCCCAGGCCAGGAATCAAAGCCACACCACAGCAGCATTCTGAGCCACGGCAGTGAC
AATGCTGGATCCTTAACCTGCTGAGCCATCAGGGAACTCCTACTTTAGAATTTTTTAAAT
TAACTATGTTATAAATTATTCCACATATTGAAAATATATAATTTCTTCATTTAAATCCTT
TGTAAATAGTAAGTTTGTTTGATGGCTCCTTTTTACATGAAGTAAAAAGCAAATTACTGA
GCTATGTTAGGTTATATATAACATCAGACGATTGAAGCCTCAGATGGACTATAGGCTTCA
GATTCAGTTTCTGTTGCCCTTCACTGAGGTAACTTCATTACTCATTTCCATGTCAATATT
TGATTGTTTATTTTTGGTCATTTCCATTTATCAAAGGGAATTTGGAATGTGTTGAATAAT
ATCAGGCAGTTGTTCAAGCAAGAATACATCAAACTTACTTGCAAGTTCAGAGGCTGTCAT
GGGAAATTAGTATTTTTGAGCCCCTAACATGGTCCCTATCCTATGCTAAACACTTTGATA
TTTAATTCCCAAATCCCTTAAATATGGGATGATGTTATCTCTGCAGAAGTAAAGATGGTG
GGATAGATCTTAATGGAAAAAGAGAAATGTATATATACCATGCTATACTTCCTAGACAGC
AGAGAGTGGGGGTTCACAAATTTGTCTGAATATCCTAGCAACTAACACAAGGAACCATCC
CATTAATTACATAATTTGTTGTTTCTAAGAGAGCTTCAACATCCTAAGAAAAGCATAATT
ATTTATTAAGGTGGGTGAGATTTTTTTCATAACAAATACTTTGCCTAAAATAAGCAGTAT
TCCCAACATTTATGTTGGTACTATATATATAGAACCCTGAATTTCCTGGCTTAATGAATT
TCCATTATCCAGATTAATCCAAAGGAAAACTTTTGAAATATCAAAACAGAATGGATAAAA
TATAAATCAAGGGGAAGGGTATTTTTCTAAGTATTAAATTGCAATTTTCTGGTGTGTACC
CAGACTTTAAATATTGTTTGCTGGTTCCATTAGTAACTCATGCTTTACTTTTGTTGGATT
GCAATTTAGAGGGTTAAGTCAAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               403-1400, gnl|bosTau2|chr8 (10690281-10691320)
               

               
               403-1400, gnl|Hg17|chr9 (26895064-26893989)
               

               
               403-1400, gnl|Mm7|chr4 (93961510-93960133)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               403-1400, gnl|bosTau2|chr8 (10690281-10691320)
               

               
               403-1400, gnl|Hg17|chr9 (26895064-26893989)
               

               
               403-1400, gnl|Mm7|chr4 (93961510-93960133)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ste (0.135208)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)
               

               
               pgl (0.118483)

	403-1400, gnl\|bosTau2\|chr8 (10690281-10691320)
	403-1400, gnl\|Hg17\|chr9 (26895064-26893989)
	403-1400, gnl\|Mm7\|chr4 (93961510-93960133)