Non-Coding RNA Search

Ss1.1-Pig1-3B07.5

Sequence:


               
               AAAGAAAAAAATATATATATTCTTTATTTTTTAAATGTCAGTGGGTAATGACATAATATA
GTGATGTTTTTTAAATGTCAGTGGGTAATGACATAATACAGTGATGTTTATTATGTTGAT
GACTCTGGGAATACAAAACATGGCTTTCCTCATATGCAAAAGAGGCCTTTGATGAGAGAC
TAACACATAGTGAAATTTGTGAATGTGTATTATATGCAATATTTCAAGTCAAAAAAAATA
TGGAAAGGGATTATCAGTGACCTCTATTTTATTAACCCTCACTTCTTTTAAATTAACAGC
TATTGCAATTTAATTCTTGAGCATAACAATGTTAGGTTAGTGAGAGCTTAGAATACATTA
TTTTGTGTTACTGTGATGGCAATGCAGTTCTTCAAATCATTTCTGATCATTCAAGGTCTT
TAACCTTTAGCCCATAGAGAGCACCCTACCTCTTATCAACATTAGCTGAGACTTACAAGG
TCATTGTCTAGCTCTATTCTAATTGTATATAAAATGCTCCTTTCAGGTTTTTGCCGTATT
CAAAACCTATCTTTGTTTTTCAGATGGAATGCAAAGCAATTAAGTGTTTGTGTTTTAACC
CAGGAGGGAGCAGTCCTGAGGATTTCTAGGGAAAAAGAGTCTCCCCTCACCCCTCCCTGC
CAAATGTCCTTACATCTAGCATTCTTCCCTCTTCCCACTTCCACGACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAAAAAATATATATATTCTTTATTTTTTAAATGTCAGTGGGTAATGACATAATATA
GTGATGTTTTTTAAATGTCAGTGGGTAATGACATAATACAGTGATGTTTATTATGTTGAT
GACTCTGGGAATACAAAACATGGCTTTCCTCATATGCAAAAGAGGCCTTTGATGAGAGAC
TAACACATAGTGAAATTTGTGAATGTGTATTATATGCAATATTTCAAGTCAAAAAAAATA
TGGAAAGGGATTATCAGTGACCTCTATTTTATTAACCCTCACTTCTTTTAAATTAACAGC
TATTGCAATTTAATTCTTGAGCATAACAATGTTAGGTTAGTGAGAGCTTAGAATACATTA
TTTTGTGTTACTGTGATGGCAATGCAGTTCTTCAAATCATTTCTGATCATTCAAGGTCTT
TAACCTTTAGCCCATAGAGAGCACCCTACCTCTTATCAACATTAGCTGAGACTTACAAGG
TCATTGTCTAGCTCTATTCTAATTGTATATAAAATGCTCCTTTCAGGTTTTTGCCGTATT
CAAAACCTATCTTTGTTTTTCAGATGGAATGCAAAGCAATTAAGTGTTTGTGTTTTAACC
CAGGAGGGAGCAGTCCTGAGGATTTCTAGGGAAAAAGAGTCTCCCCTCACCCCTCCCTGC
CAAATGTCCTTACATCTAGCATTCTTCCCTCTTCCCACTTCCACGACC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               104-695, gnl|bosTau2|chr6 (4310033-4309443)
               

               
               104-695, gnl|Hg17|chr18 (27311353-27311993)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-695, gnl|bosTau2|chr6 (4310033-4309443)
               

               
               104-695, gnl|Hg17|chr18 (27311353-27311993)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ski (0.146735)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               pgl (0.118483)

	104-695, gnl\|bosTau2\|chr6 (4310033-4309443)
	104-695, gnl\|Hg17\|chr18 (27311353-27311993)