Non-Coding RNA Search

Ss1.1-Pig1-40K05.5.5

Sequence:


               
               ATCTTCAGACCAGTGATTTCTCTTCCTCTGGTCAGTTAGTTACCCTGAAAACACTGGATT
TGCCGTGCAAATGCCTTTTAAAAGACACTGTGGTGGAAACACTCCTCAGAGACTCCCTCA
ACCCAAGAGGGAGAGGAGTCGACCGACTGGAACGAAGGGGCCACTCGCTGTTGTACACAT
TTCTTATTTACAATTGTCATTTATGTGATATATATATAAATATATATATAAGTATATATT
GTGTATATATATGCAACATTTTATATTTTTCATGGATACATTTTTATCATTTCAAAAAAT
GTGTATTTCACATTTCTTGGACTATTTTTTTAGCTGTTATTCAGTTATGCATTTTGTATA
CTCATATGGTATTTAGTAATAAAATTCTACTTATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTTCAGACCAGTGATTTCTCTTCCTCTGGTCAGTTAGTTACCCTGAAAACACTGGATT
TGCCGTGCAAATGCCTTTTAAAAGACACTGTGGTGGAAACACTCCTCAGAGACTCCCTCA
ACCCAAGAGGGAGAGGAGTCGACCGACTGGAACGAAGGGGCCACTCGCTGTTGTACACAT
TTCTTATTTACAATTGTCATTTATGTGATATATATATAAATATATATATAAGTATATATT
GTGTATATATATGCAACATTTTATATTTTTCATGGATACATTTTTATCATTTCAAAAAAT
GTGTATTTCACATTTCTTGGACTATTTTTTTAGCTGTTATTCAGTTATGCATTTTGTATA
CTCATATGGTATTTAGTAATAAAATTCTACTTATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               161-394, gnl|bosTau2|chr2 (81833519-81833294)
               

               
               161-394, gnl|Hg17|chr1 (24426883-24427100)
               

               
               161-394, gnl|Mm7|chr4 (134920556-134920331)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-394, gnl|bosTau2|chr2 (81833519-81833294)
               

               
               161-394, gnl|Hg17|chr1 (24426883-24427100)
               

               
               161-394, gnl|Mm7|chr4 (134920556-134920331)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csk (0.422238)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.422238)
               

               
               bla (0.124347)

	161-394, gnl\|bosTau2\|chr2 (81833519-81833294)
	161-394, gnl\|Hg17\|chr1 (24426883-24427100)
	161-394, gnl\|Mm7\|chr4 (134920556-134920331)