Non-Coding RNA Search

Ss1.1-Pig1-42G17.5

Sequence:


               
               GGCTTCCTGGCACCAATCAGTTTGTGGACATGACTACTCAGGTTTGTATATGTTTAGTAT
CAATAAAGAAACTGCACAGTTTTGAATAGGAAAAATGTATTCTAATAGATTTTGAGCTTG
AATTTAGGAATATTTCAGTATATATAGTTTTATTCATTTTATGTGAATCATAGTACAAAT
ATGTCATGGTGATTTAAAGTAGCTATCAGGAACAAGTTCTTGGAAATCACTTGTCTGTGA
TAGGAAACAGTTTTACAGTATTAAATCACTTTGTTACAGTTTAGAAGAGAACTACAGTGG
ATCCCCATTCAGCACTCTGATTTTAGCTGAGGTGCCACCAACCTTAGGGCTCTTATGTTT
TAAACTTTTGAATGTCCCACAAAGGAAAAAAGAGAGAAACAATTAAGGAAGATGCCCTGA
AATTACAGATTTTTTTTTTTTTAAGGGCATATTTTTAAGCCTGCTCTTAGGATAGTAAAA
AAGCTTCCGTAAAACAGGGGGGGACCTGGGCTTGTTTCCTTTAAATTCAGCTGGGGGAGG
AGCCAAGGGAACCTTCCCCTCCAGTTCCCACGTCCTTGGGGGAGCTGGAATACACATGGG
CTCCAGCTTTAAACGGGAGGAGGCTGCCCCCTGGGGGCAAATGGCTATGCAGGGTTGAGG
GCTAAGAACACAAAAACACAAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTTCCTGGCACCAATCAGTTTGTGGACATGACTACTCAGGTTTGTATATGTTTAGTAT
CAATAAAGAAACTGCACAGTTTTGAATAGGAAAAATGTATTCTAATAGATTTTGAGCTTG
AATTTAGGAATATTTCAGTATATATAGTTTTATTCATTTTATGTGAATCATAGTACAAAT
ATGTCATGGTGATTTAAAGTAGCTATCAGGAACAAGTTCTTGGAAATCACTTGTCTGTGA
TAGGAAACAGTTTTACAGTATTAAATCACTTTGTTACAGTTTAGAAGAGAACTACAGTGG
ATCCCCATTCAGCACTCTGATTTTAGCTGAGGTGCCACCAACCTTAGGGCTCTTATGTTT
TAAACTTTTGAATGTCCCACAAAGGAAAAAAGAGAGAAACAATTAAGGAAGATGCCCTGA
AATTACAGATTTTTTTTTTTTTAAGGGCATATTTTTAAGCCTGCTCTTAGGATAGTAAAA
AAGCTTCCGTAAAACAGGGGGGGACCTGGGCTTGTTTCCTTTAAATTCAGCTGGGGGAGG
AGCCAAGGGAACCTTCCCCTCCAGTTCCCACGTCCTTGGGGGAGCTGGAATACACATGGG
CTCCAGCTTTAAACGGGAGGAGGCTGCCCCCTGGGGGCAAATGGCTATGCAGGGTTGAGG
GCTAAGAACACAAAAACACAAATT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-606, gnl|bosTau2|chr5 (66333304-66332697)
               

               
               2-606, gnl|Hg17|chr22 (16408109-16408727)
               

               
               2-606, gnl|Mm7|chr6 (120792679-120793245)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-606, gnl|bosTau2|chr5 (66333304-66332697)
               

               
               2-606, gnl|Hg17|chr22 (16408109-16408727)
               

               
               2-606, gnl|Mm7|chr6 (120792679-120793245)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pty (0.142714)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	2-606, gnl\|bosTau2\|chr5 (66333304-66332697)
	2-606, gnl\|Hg17\|chr22 (16408109-16408727)
	2-606, gnl\|Mm7\|chr6 (120792679-120793245)