Ss1.1-Pig1-43A02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGGTCATGCGGGACGAGGAGCTGAAGACCAGAGGATTGGAGGAATCTATGGTGTGGGCA AAGCTGCGGTCCACCCCCCGGCTCTGGCCGTCCTCAGCCACACCCCAGACGGAGCCACCC AGACCATCGCGTGGGTGGGCAAAGGCATCGTCTACGACACCGGGGGTCTCAGCATGAAGG GGAAGACCACGATGCCGGGGATGAAGAGGGACTGCGGGGGCGCCGCAGCTGTCCTGGGGG CCTTCAGAGCCGCCGTCAGGCAGGGTTTCAAAGACAACCTGCACGCTGTGTTCTGCTTGG CCGAGAACTCGGTGGGGCCCAAGGCCACGAGGCCAGACGACATCCACCTGCTGTACTCAG GAAAGTGAGGCGGCCCCTCAGCCCTCCCCGCCCACGGGGCCCTCTCCCTCCTGTGGTCCC TGTGGTTGGCTCTCCTGGCCCTTCCCGGGGCCCGCTGGCCAGTCCCAGCCAGAGCCAGTG ACAGGTGCCCTGGACAACAGGCCTCTTGCTCCCAGGGTGCCCGCCAGGTGGGCTGTGTTG CTGGGCGAGGCCTTGGTGCCCCCCAGGGCCTTGGGGACGAGCCCTTTCCGAGCTTTCTGC TTTGTGTTCTTTGGGTATCTCAAGCCCTGCACACCCACATTCCCTCCTGGGGGGCCCCCT GCACCTCCTGGAGATCAGCCCCTGGACGCCTCCTCAGCTGCAGAAGGAAACTCGAAAATA ACAGCAGGCAGCCCGGGGTTCAGAGTCGGAGGGTCCCCGCCCCCCCCTTGTGCTTTTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGGTCATGCGGGACGAGGAGCTGAAGACCAGAGGATTGGAGGAATCTATGGTGTGGGCA AAGCTGCGGTCCACCCCCCGGCTCTGGCCGTCCTCAGCCACACCCCAGACGGAGCCACCC AGACCATCGCGTGGGTGGGCAAAGGCATCGTCTACGACACCGGGGGTCTCAGCATGAAGG GGAAGACCACGATGCCGGGGATGAAGAGGGACTGCGGGGGCGCCGCAGCTGTCCTGGGGG CCTTCAGAGCCGCCGTCAGGCAGGGTTTCAAAGACAACCTGCACGCTGTGTTCTGCTTGG CCGAGAACTCGGTGGGGCCCAAGGCCACGAGGCCAGACGACATCCACCTGCTGTACTCAG GAAAGTGAGGCGGCCCCTCAGCCCTCCCCGCCCACGGGGCCCTCTCCCTCCTGTGGTCCC TGTGGTTGGCTCTCCTGGCCCTTCCCGGGGCCCGCTGGCCAGTCCCAGCCAGAGCCAGTG ACAGGTGCCCTGGACAACAGGCCTCTTGCTCCCAGGGTGCCCGCCAGGTGGGCTGTGTTG CTGGGCGAGGCCTTGGTGCCCCCCAGGGCCTTGGGGACGAGCCCTTTCCGAGCTTTCTGC TTTGTGTTCTTTGGGTATCTCAAGCCCTGCACACCCACATTCCCTCCTGGGGGGCCCCCT GCACCTCCTGGAGATCAGCCCCTGGACGCCTCCTCAGCTGCAGAAGGAAACTCGAAAATA ACAGCAGGCAGCCCGGGGTTCAGAGTCGGAGGGTCCCCGCCCCCCCCTTGTGCTTTTGGC |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 41-185, gnl|bosTau2|chr13 (38096837-38096693) | |
| 41-185, gnl|canFam2|chr24 (46450460-46450613) | |
| 41-185, gnl|danRer3|chrNA (107403768-107403917) | |
| 41-185, gnl|dasNov1|scaffold_32517 (253-87) | |
| 41-185, gnl|echTel1|scaffold_282823 (45450-45278) | |
| 41-185, gnl|fr1|chrUn (176363440-176363294) | |
| 41-185, gnl|galGal2|chr20 (10584872-10584725) | |
| 41-185, gnl|hg17|chr20 (56709477-56709650) | |
| 41-185, gnl|Hg17|chr20 (56709477-56709621) | |
| 41-185, gnl|mm7|chr2 (173860443-173860611) | |
| 41-185, gnl|Mm7|chr2 (173860443-173860587) | |
| 41-185, gnl|monDom2|scaffold_1 (173182037-173182209) | |
| 41-185, gnl|oryCun1|scaffold_208180 (51343-51509) | |
| 41-185, gnl|panTro1|chr21 (59707082-59707255) | |
| 41-185, gnl|rheMac2|chr10 (5826295-5826139) | |
| 41-185, gnl|rn3|chr3 (164946836-164947004) | |
| 41-185, gnl|tetNig1|chr11 (2142058-2142204) | |
| 262-420, gnl|bosTau2|chr13 (38089765-38089609) | |
| 262-420, gnl|canFam2|chr24 (46457138-46457261) | |
| 262-420, gnl|danRer3|chrNA (107407178-107407291) | |
| 262-420, gnl|echTel1|scaffold_304214 (5085-4964) | |
| 262-420, gnl|fr1|chrUn (176362960-176362851) | |
| 262-420, gnl|galGal2|chr20 (10582214-10582091) | |
| 262-420, gnl|hg17|chr20 (56720930-56721053) | |
| 262-420, gnl|Hg17|chr20 (56720940-56721072) | |
| 262-420, gnl|mm7|chr2 (173864609-173864729) | |
| 262-420, gnl|Mm7|chr2 (173864619-173864811) | |
| 262-420, gnl|monDom2|scaffold_1 (173191536-173191659) | |
| 262-420, gnl|oryCun1|scaffold_168488 (214-336) | |
| 262-420, gnl|panTro1|chr21 (59718613-59718736) | |
| 262-420, gnl|rheMac2|chr10 (5816921-5816798) | |
| 262-420, gnl|rn3|chr3 (164951473-164951594) | |
| 262-420, gnl|tetNig1|chr11 (2142442-2142549) | |
| 262-420, gnl|xenTro1|scaffold_22019 (2193-2305) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-185, gnl|bosTau2|chr13 (38096837-38096693) | |
| 41-185, gnl|canFam2|chr24 (46450460-46450613) | |
| 41-185, gnl|danRer3|chrNA (107403768-107403917) | |
| 41-185, gnl|dasNov1|scaffold_32517 (253-87) | |
| 41-185, gnl|echTel1|scaffold_282823 (45450-45278) | |
| 41-185, gnl|fr1|chrUn (176363440-176363294) | |
| 41-185, gnl|galGal2|chr20 (10584872-10584725) | |
| 41-185, gnl|hg17|chr20 (56709477-56709650) | |
| 41-185, gnl|Hg17|chr20 (56709477-56709621) | |
| 41-185, gnl|mm7|chr2 (173860443-173860611) | |
| 41-185, gnl|Mm7|chr2 (173860443-173860587) | |
| 41-185, gnl|monDom2|scaffold_1 (173182037-173182209) | |
| 41-185, gnl|oryCun1|scaffold_208180 (51343-51509) | |
| 41-185, gnl|panTro1|chr21 (59707082-59707255) | |
| 41-185, gnl|rheMac2|chr10 (5826295-5826139) | |
| 41-185, gnl|rn3|chr3 (164946836-164947004) | |
| 41-185, gnl|tetNig1|chr11 (2142058-2142204) | |
| 262-420, gnl|bosTau2|chr13 (38089765-38089609) | |
| 262-420, gnl|canFam2|chr24 (46457138-46457261) | |
| 262-420, gnl|danRer3|chrNA (107407178-107407291) | |
| 262-420, gnl|echTel1|scaffold_304214 (5085-4964) | |
| 262-420, gnl|fr1|chrUn (176362960-176362851) | |
| 262-420, gnl|galGal2|chr20 (10582214-10582091) | |
| 262-420, gnl|hg17|chr20 (56720930-56721053) | |
| 262-420, gnl|Hg17|chr20 (56720940-56721072) | |
| 262-420, gnl|mm7|chr2 (173864609-173864729) | |
| 262-420, gnl|Mm7|chr2 (173864619-173864811) | |
| 262-420, gnl|monDom2|scaffold_1 (173191536-173191659) | |
| 262-420, gnl|oryCun1|scaffold_168488 (214-336) | |
| 262-420, gnl|panTro1|chr21 (59718613-59718736) | |
| 262-420, gnl|rheMac2|chr10 (5816921-5816798) | |
| 262-420, gnl|rn3|chr3 (164951473-164951594) | |
| 262-420, gnl|tetNig1|chr11 (2142442-2142549) | |
| 262-420, gnl|xenTro1|scaffold_22019 (2193-2305) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |