Non-Coding RNA Search

Ss1.1-Pig1-43G05.5

Sequence:


               
               GCCCGGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCAAGCTGACCAAAGATGCCTCCCCC
TGTAGAAGACGCCGCCACACCCGGTCGGAATCTCGAGTTTTCGAGCGGGTGCTGCTGCCG
CGCGGGCGGAGAGGAGCCGCTGGAGGGACGTGGGTGCGCGGCAGCCCAGGCGCGGGCAGG
GCCGAGAGCCCGACCTCGGGAGGGTGGGAGGCGGTGCGGCTCTGGCCCCGGGGAGCCTGG
GGATCCGGGGTCCCCTTTTCTACGAGAGCCTTTAAACTTGAGACAGAGGCCGCGGTTCTG
CTCCGTGATGGAGGGGCCTTCGGCAGGAGCGCTGGCTTTGGAGGGACCTTCGTCGCCGTC
TCCTCCCACGACCTACACTCTCAACGGTGCCCCAGCAGGGGCAGAACTAACTGCGAGGGG
GAGGCCAGAGGACTCTGAGCAAGGAGTGCTGATTCTGAGAAAAAGAAAATATTTATTAAA
TAAAACGAAACACGTTTCTGTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCGGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCAAGCTGACCAAAGATGCCTCCCCC
TGTAGAAGACGCCGCCACACCCGGTCGGAATCTCGAGTTTTCGAGCGGGTGCTGCTGCCG
CGCGGGCGGAGAGGAGCCGCTGGAGGGACGTGGGTGCGCGGCAGCCCAGGCGCGGGCAGG
GCCGAGAGCCCGACCTCGGGAGGGTGGGAGGCGGTGCGGCTCTGGCCCCGGGGAGCCTGG
GGATCCGGGGTCCCCTTTTCTACGAGAGCCTTTAAACTTGAGACAGAGGCCGCGGTTCTG
CTCCGTGATGGAGGGGCCTTCGGCAGGAGCGCTGGCTTTGGAGGGACCTTCGTCGCCGTC
TCCTCCCACGACCTACACTCTCAACGGTGCCCCAGCAGGGGCAGAACTAACTGCGAGGGG
GAGGCCAGAGGACTCTGAGCAAGGAGTGCTGATTCTGAGAAAAAGAAAATATTTATTAAA
TAAAACGAAACACGTTTCTGTGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-504, gnl|bosTau2|chr1 (42043100-42043577)
               

               
               9-504, gnl|Hg17|chr3 (124485963-124485467)
               

               
               9-504, gnl|Mm7|chr16 (34978532-34979011)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-504, gnl|bosTau2|chr1 (42043100-42043577)
               

               
               9-504, gnl|Hg17|chr3 (124485963-124485467)
               

               
               9-504, gnl|Mm7|chr16 (34978532-34979011)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mcp (0.170648)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               eep (0.122564)

	9-504, gnl\|bosTau2\|chr1 (42043100-42043577)
	9-504, gnl\|Hg17\|chr3 (124485963-124485467)
	9-504, gnl\|Mm7\|chr16 (34978532-34979011)