Ss1.1-Pig1-44H03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGAGTTTCAGATTGATGACACCTACTCTGTCCCAGGTGTGGGAACAGTGGTGTCAGGG ACAACACTGAGGGGCCTGATCAAGCTGAATGACACACTGCTGCTGGGCCCGGATCCCTTG GGTAACTTCCTGTCCATTGCTGTCAAATCGATCCATCGCAAGCGCATGCCGGTCAAGGAG GTGCGGGGGGGCCAGACGGCCTCGTTCGCACTGAAGAAGATCAAGCGCTCATCCATCCGC AAGGGCATGGTGATGGTTTCTCCACGCTTGAATCCCCAAGCATCCTGGGAGTTTGAGGCC GAGATCCTCGTCCTCCACCACCCCACCACCATTAGCCCACGTTACCAGGCCATGGTGCAC TGTGGGAGCATCAGGCAGACGGCCACCATCCTGAGCATGGATAAAGACTGTCTGCGCACC GGGGACAAGGCCACCGTGCACTTCCGCTTCATCAAGACCCCCGAGTACCTGCACATAGAC CAGCGGCTGGTGTTCCGGGAAGGCCGCACCAAGGCTGTGGGCACCATCACTAAGCTCCTC CAGACCACCAACAACTCCCCAATGAACTCCAAGCCCCAGCAGATTAAAATGCAGTCAACA AAAAAGGGTCCTCTGACCAAACGAGAAGAGGGGGGCTCCTCTGGAGGACCAGCAGTTGGG GCACCCCCACCTGGAGATGAAGCTTGCTCTCTCGGGGCTCCACAGCCAGCTGCATCCAGC AGTCTCCAGCCACAGCCCAAGCCCAGCAGTGGGGGCCGACGGCGCGGGGGCCAGCGTCAC AAGGTGAAGTCCCAGGGGGCCTGCATGACTCCCGCCAGTGGCTGCTGAGTCTCCCCCAGC CCACCTCCACCACCCAAGGGATCCTCGTGCCCTGGCCGCCGCTCCGCAAGATGGGCCAGA GCAACTCTGACCGCCACTCGCCCTCCCCCAGGCCGCAGCTGGAGCCTCGTCATTCCCCCA CCCCCGTTTCCCAGGGGGGCTGTAATTTATAAGCTGAGGAAGGTGGCCAGACTTCTGGAG GACTGACCATCTCCCATTCTCTTCCTCACCTTCTTCCTCCCTCACACCTTTTTTGTACAT CTGGGCCCTTAGTTTTTATTCTTTTTATTATATCTCTCTCTCTACCTAATGTGTGTGTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGAGTTTCAGATTGATGACACCTACTCTGTCCCAGGTGTGGGAACAGTGGTGTCAGGG ACAACACTGAGGGGCCTGATCAAGCTGAATGACACACTGCTGCTGGGCCCGGATCCCTTG GGTAACTTCCTGTCCATTGCTGTCAAATCGATCCATCGCAAGCGCATGCCGGTCAAGGAG GTGCGGGGGGGCCAGACGGCCTCGTTCGCACTGAAGAAGATCAAGCGCTCATCCATCCGC AAGGGCATGGTGATGGTTTCTCCACGCTTGAATCCCCAAGCATCCTGGGAGTTTGAGGCC GAGATCCTCGTCCTCCACCACCCCACCACCATTAGCCCACGTTACCAGGCCATGGTGCAC TGTGGGAGCATCAGGCAGACGGCCACCATCCTGAGCATGGATAAAGACTGTCTGCGCACC GGGGACAAGGCCACCGTGCACTTCCGCTTCATCAAGACCCCCGAGTACCTGCACATAGAC CAGCGGCTGGTGTTCCGGGAAGGCCGCACCAAGGCTGTGGGCACCATCACTAAGCTCCTC CAGACCACCAACAACTCCCCAATGAACTCCAAGCCCCAGCAGATTAAAATGCAGTCAACA AAAAAGGGTCCTCTGACCAAACGAGAAGAGGGGGGCTCCTCTGGAGGACCAGCAGTTGGG GCACCCCCACCTGGAGATGAAGCTTGCTCTCTCGGGGCTCCACAGCCAGCTGCATCCAGC AGTCTCCAGCCACAGCCCAAGCCCAGCAGTGGGGGCCGACGGCGCGGGGGCCAGCGTCAC AAGGTGAAGTCCCAGGGGGCCTGCATGACTCCCGCCAGTGGCTGCTGAGTCTCCCCCAGC CCACCTCCACCACCCAAGGGATCCTCGTGCCCTGGCCGCCGCTCCGCAAGATGGGCCAGA GCAACTCTGACCGCCACTCGCCCTCCCCCAGGCCGCAGCTGGAGCCTCGTCATTCCCCCA CCCCCGTTTCCCAGGGGGGCTGTAATTTATAAGCTGAGGAAGGTGGCCAGACTTCTGGAG GACTGACCATCTCCCATTCTCTTCCTCACCTTCTTCCTCCCTCACACCTTTTTTGTACAT CTGGGCCCTTAGTTTTTATTCTTTTTATTATATCTCTCTCTCTACCTAATGTGTGTGTGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 37-219, gnl|bosTau2|chr5 (69318329-69318147) | |
| 37-219, gnl|Hg17|chr22 (37446763-37446945) | |
| 37-219, gnl|Mm7|chr15 (79800218-79800400) | |
| 355-534, gnl|bosTau2|chr5 (69316626-69316447) | |
| 355-534, gnl|canFam2|chr10 (29153493-29153292) | |
| 355-534, gnl|danRer3|chr22 (11804946-11805128) | |
| 355-534, gnl|dasNov1|scaffold_17608 (29735-29533) | |
| 355-534, gnl|echTel1|scaffold_307671 (5930-5731) | |
| 355-534, gnl|fr1|chrUn (157661446-157661255) | |
| 355-534, gnl|galGal2|chr1 (47524233-47524034) | |
| 355-534, gnl|hg17|chr22 (37448479-37448681) | |
| 355-534, gnl|Hg17|chr22 (37448487-37448666) | |
| 355-534, gnl|loxAfr1|scaffold_56565 (5226-5026) | |
| 355-534, gnl|mm7|chr15 (79801718-79801907) | |
| 355-534, gnl|Mm7|chr15 (79801726-79801905) | |
| 355-534, gnl|monDom2|scaffold_133 (2378638-2378437) | |
| 355-534, gnl|panTro1|chr23 (37682202-37682404) | |
| 355-534, gnl|rheMac2|chr10 (82642595-82642797) | |
| 355-534, gnl|rn3|chr7 (117990312-117990513) | |
| 355-534, gnl|tetNig1|chr3 (8315642-8315451) | |
| 355-534, gnl|xenTro1|scaffold_325 (130313-130111) | |
| 733-1139, gnl|bosTau2|chr5 (69314166-69313758) | |
| 733-1139, gnl|Hg17|chr22 (37451114-37451529) | |
| 733-1139, gnl|Mm7|chr15 (79804139-79804520) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 37-219, gnl|bosTau2|chr5 (69318329-69318147) | |
| 37-219, gnl|Hg17|chr22 (37446763-37446945) | |
| 37-219, gnl|Mm7|chr15 (79800218-79800400) | |
| 355-534, gnl|bosTau2|chr5 (69316626-69316447) | |
| 355-534, gnl|canFam2|chr10 (29153493-29153292) | |
| 355-534, gnl|danRer3|chr22 (11804946-11805128) | |
| 355-534, gnl|dasNov1|scaffold_17608 (29735-29533) | |
| 355-534, gnl|echTel1|scaffold_307671 (5930-5731) | |
| 355-534, gnl|fr1|chrUn (157661446-157661255) | |
| 355-534, gnl|galGal2|chr1 (47524233-47524034) | |
| 355-534, gnl|hg17|chr22 (37448479-37448681) | |
| 355-534, gnl|Hg17|chr22 (37448487-37448666) | |
| 355-534, gnl|loxAfr1|scaffold_56565 (5226-5026) | |
| 355-534, gnl|mm7|chr15 (79801718-79801907) | |
| 355-534, gnl|Mm7|chr15 (79801726-79801905) | |
| 355-534, gnl|monDom2|scaffold_133 (2378638-2378437) | |
| 355-534, gnl|panTro1|chr23 (37682202-37682404) | |
| 355-534, gnl|rheMac2|chr10 (82642595-82642797) | |
| 355-534, gnl|rn3|chr7 (117990312-117990513) | |
| 355-534, gnl|tetNig1|chr3 (8315642-8315451) | |
| 355-534, gnl|xenTro1|scaffold_325 (130313-130111) | |
| 733-1139, gnl|bosTau2|chr5 (69314166-69313758) | |
| 733-1139, gnl|Hg17|chr22 (37451114-37451529) | |
| 733-1139, gnl|Mm7|chr15 (79804139-79804520) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |