Non-Coding RNA Search

Ss1.1-Pig1-45G10.5

Sequence:


               
               GCAGTGCACATCCAGAGGCTTTCTCTTGCTACCCTGGTTTGGACTGGGGAGGGGGTCACT
GCGGCCTTTCTCCCCTGCAAAGGACCATGGACGGCTCCTTCGTCCAGCACAGTGTGAGGG
TTCTGCAGGAGCTCAACAAGCAGCGGGAGAGGGGCCAGTACTGCGATGCCACCTTGGACG
TGGGGGGCCTGGTGTTCAAGGCACACTGGAGTGTTCTTGCTTGCTGCAGCCACTTCTTCC
AGAGCCTCTATGGGGATGGCTCAGGGGGCAGTGTGGTCCTCCCCGCTGGCTTCGCAGAGA
TCTTTGGCCTCCTGTTGGACTTTTTCTACACTGGTCACCTTGCTCTGACCTCAGGGAACC
GGGATCAGGTGCTCTTGGCAGCCAGGGAGTTGCGAGTGCCCGAGGCTGTAGAGCTGTGCC
AGAGCTTCAAGCCCAAAACCTCAGTGGGACAGGTGCCAAGCGGCCAGAGTGGACTGGGAA
AAGCTGGCCCCCGGGATGTGAACAGCCACCTCAAGGAGCCAGCAGGCTTGGAGGAAGAGG
ACGTGTCGCGGACTCTGGGTCAGGTCCCCAGGGATCAGGAGCTCAGTGGCAGTCCCAGCC
CCCAGAGGCCCCAGCTCGGTCTCCCTGCTCAGAGCGAGAGCCCCTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTGCACATCCAGAGGCTTTCTCTTGCTACCCTGGTTTGGACTGGGGAGGGGGTCACT
GCGGCCTTTCTCCCCTGCAAAGGACCATGGACGGCTCCTTCGTCCAGCACAGTGTGAGGG
TTCTGCAGGAGCTCAACAAGCAGCGGGAGAGGGGCCAGTACTGCGATGCCACCTTGGACG
TGGGGGGCCTGGTGTTCAAGGCACACTGGAGTGTTCTTGCTTGCTGCAGCCACTTCTTCC
AGAGCCTCTATGGGGATGGCTCAGGGGGCAGTGTGGTCCTCCCCGCTGGCTTCGCAGAGA
TCTTTGGCCTCCTGTTGGACTTTTTCTACACTGGTCACCTTGCTCTGACCTCAGGGAACC
GGGATCAGGTGCTCTTGGCAGCCAGGGAGTTGCGAGTGCCCGAGGCTGTAGAGCTGTGCC
AGAGCTTCAAGCCCAAAACCTCAGTGGGACAGGTGCCAAGCGGCCAGAGTGGACTGGGAA
AAGCTGGCCCCCGGGATGTGAACAGCCACCTCAAGGAGCCAGCAGGCTTGGAGGAAGAGG
ACGTGTCGCGGACTCTGGGTCAGGTCCCCAGGGATCAGGAGCTCAGTGGCAGTCCCAGCC
CCCAGAGGCCCCAGCTCGGTCTCCCTGCTCAGAGCGAGAGCCCCTCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55960941|emb|CAI16078.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55960941|emb|CAI16078.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-648, gnl|bosTau2|chr16 (34616596-34615959)
               

               
               11-648, gnl|Hg17|chr1 (6574862-6575497)
               

               
               11-648, gnl|Mm7|chr4 (151016656-151016058)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-648, gnl|bosTau2|chr16 (34616596-34615959)
               

               
               11-648, gnl|Hg17|chr1 (6574862-6575497)
               

               
               11-648, gnl|Mm7|chr4 (151016656-151016058)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	11-648, gnl\|bosTau2\|chr16 (34616596-34615959)
	11-648, gnl\|Hg17\|chr1 (6574862-6575497)
	11-648, gnl\|Mm7\|chr4 (151016656-151016058)