Ss1.1-Pig1-45L22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCCCTCGGGGCTGAAGGCGGTGGTGGGGGAAAAAATTTTGAGTGGAGTCATTCGGAGC GTCAAGAAGGATGGGGAGTGGAAGGTGCTCATCATGGACCACCCGAGCATGCGCATTTTG TCATCCTGCTGTAAGATGTCAGACATCCTGGCTGAGGGCATCACCATTGTTGAGGACATC AACAAACGGCGCGAACCCATCCCCAGCCTGGAGGCCATTTATCTGCTGAGCCCCACGGAG AAGTCGGTGCAGGCCCTGATTGCAGACTTCCGGGGGACACCGACCTTCACCTACAAAGCA GCACATGTCTTCTTCACCGATACCTGCCCGGAGCCCCTGTTCAGTGAGCTGGGCCGCTCC CGTCTGGCAAAGATGGTGAAGACGCTGAAAGAGATCCACCTTGCTTTCCTCCCATATGAG GCCCAGGTGTTCTCCCTGGATGCGCCCCACAGCACCTACAACCTCTACTGCCCCTTCCGG GCAGGTGAACGGGCACGGCAGCTTGAGGTGCTGGCTCAACAAATCGCCACCCTTTGCGCC ACACTGCAAGAGTACCCAGCCATCCGCTACCGCAAGGGCCCAGAGGATACGGCCCAGCTG GCCCACGCTGTCCTAGCCAAGCTGAACGCCTTCAAGGCCGACACTCCCAGTCTGGGCGAG GGCCCTGAGAAAACTCGCTCACAGCTACTCATCATGGACCGAGCAGCTGATCCCGTGTCT CCACTGCTGCATGAACTCACTTTCCAGGCCATGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCCCTCGGGGCTGAAGGCGGTGGTGGGGGAAAAAATTTTGAGTGGAGTCATTCGGAGC GTCAAGAAGGATGGGGAGTGGAAGGTGCTCATCATGGACCACCCGAGCATGCGCATTTTG TCATCCTGCTGTAAGATGTCAGACATCCTGGCTGAGGGCATCACCATTGTTGAGGACATC AACAAACGGCGCGAACCCATCCCCAGCCTGGAGGCCATTTATCTGCTGAGCCCCACGGAG AAGTCGGTGCAGGCCCTGATTGCAGACTTCCGGGGGACACCGACCTTCACCTACAAAGCA GCACATGTCTTCTTCACCGATACCTGCCCGGAGCCCCTGTTCAGTGAGCTGGGCCGCTCC CGTCTGGCAAAGATGGTGAAGACGCTGAAAGAGATCCACCTTGCTTTCCTCCCATATGAG GCCCAGGTGTTCTCCCTGGATGCGCCCCACAGCACCTACAACCTCTACTGCCCCTTCCGG GCAGGTGAACGGGCACGGCAGCTTGAGGTGCTGGCTCAACAAATCGCCACCCTTTGCGCC ACACTGCAAGAGTACCCAGCCATCCGCTACCGCAAGGGCCCAGAGGATACGGCCCAGCTG GCCCACGCTGTCCTAGCCAAGCTGAACGCCTTCAAGGCCGACACTCCCAGTCTGGGCGAG GGCCCTGAGAAAACTCGCTCACAGCTACTCATCATGGACCGAGCAGCTGATCCCGTGTCT CCACTGCTGCATGAACTCACTTTCCAGGCCATGGCC |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 79-183, gnl|bosTau2|chr7 (12389157-12389263) | |
| 79-183, gnl|Hg17|chr19 (7609898-7610031) | |
| 79-183, gnl|Mm7|chr8 (3594979-3595099) | |
| 424-576, gnl|bosTau2|chr7 (12390634-12390786) | |
| 424-576, gnl|canFam2|chr20 (55418265-55418429) | |
| 424-576, gnl|danRer3|chrUn (55728550-55728721) | |
| 424-576, gnl|dasNov1|scaffold_3815 (31937-32094) | |
| 424-576, gnl|echTel1|scaffold_293917 (12073-12258) | |
| 424-576, gnl|fr1|chrUn (239844540-239844703) | |
| 424-576, gnl|galGal2|chr17 (8478301-8478143) | |
| 424-576, gnl|hg17|chr19 (7612588-7612762) | |
| 424-576, gnl|Hg17|chr19 (7612588-7612740) | |
| 424-576, gnl|loxAfr1|scaffold_10373 (43452-43610) | |
| 424-576, gnl|mm7|chr8 (3596958-3597133) | |
| 424-576, gnl|Mm7|chr8 (3596957-3597110) | |
| 424-576, gnl|monDom2|scaffold_54 (507033-506859) | |
| 424-576, gnl|oryCun1|scaffold_151384 (6828-6654) | |
| 424-576, gnl|panTro1|chr20 (7962399-7962557) | |
| 424-576, gnl|rheMac2|chr19 (7592497-7592671) | |
| 424-576, gnl|rn3|chr12 (2519357-2519183) | |
| 424-576, gnl|tetNig1|chrUn_random (12663688-12663528) | |
| 424-576, gnl|xenTro1|scaffold_903 (218597-218442) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 79-183, gnl|bosTau2|chr7 (12389157-12389263) | |
| 79-183, gnl|Hg17|chr19 (7609898-7610031) | |
| 79-183, gnl|Mm7|chr8 (3594979-3595099) | |
| 424-576, gnl|bosTau2|chr7 (12390634-12390786) | |
| 424-576, gnl|canFam2|chr20 (55418265-55418429) | |
| 424-576, gnl|danRer3|chrUn (55728550-55728721) | |
| 424-576, gnl|dasNov1|scaffold_3815 (31937-32094) | |
| 424-576, gnl|echTel1|scaffold_293917 (12073-12258) | |
| 424-576, gnl|fr1|chrUn (239844540-239844703) | |
| 424-576, gnl|galGal2|chr17 (8478301-8478143) | |
| 424-576, gnl|hg17|chr19 (7612588-7612762) | |
| 424-576, gnl|Hg17|chr19 (7612588-7612740) | |
| 424-576, gnl|loxAfr1|scaffold_10373 (43452-43610) | |
| 424-576, gnl|mm7|chr8 (3596958-3597133) | |
| 424-576, gnl|Mm7|chr8 (3596957-3597110) | |
| 424-576, gnl|monDom2|scaffold_54 (507033-506859) | |
| 424-576, gnl|oryCun1|scaffold_151384 (6828-6654) | |
| 424-576, gnl|panTro1|chr20 (7962399-7962557) | |
| 424-576, gnl|rheMac2|chr19 (7592497-7592671) | |
| 424-576, gnl|rn3|chr12 (2519357-2519183) | |
| 424-576, gnl|tetNig1|chrUn_random (12663688-12663528) | |
| 424-576, gnl|xenTro1|scaffold_903 (218597-218442) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| fty (0.17584) | |
| jej (0.0989218) |