Ss1.1-Pig1-47A24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGGACTTTGACTTGAGCCAGTTACACAGGGGCCTGGATGCTCGGCCTGAAGTGACTCG TAATGATGTGGCACCAACCCTCCTGAGTATGCCCCAGTATCGGCCCCGCCCTGCCAATCC TGATGAAATTGGAAACTTCATTGATGAAAACCTGAAGGCAGCTGATAGTGACCCCACTGC CCCACCTTATGACTCTCTGCTGGTGTTTGATTACGAAGGCAGTGGTTCCGAAGCTGCTAG TCTGAGCTCCCTGAACTCCTCGGAGTCGGACCAAGACCAGGACTATGACTACCTGAACGA GTGGGGCAATCGCTTCAAGAAGCTGGCGGACATGTACGGAGGCGGTGAGGACGACTAGGG GACTCCAGACCGATGGCAGAGATGGGTCCCTACGCTCATGTGATGGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGGACTTTGACTTGAGCCAGTTACACAGGGGCCTGGATGCTCGGCCTGAAGTGACTCG TAATGATGTGGCACCAACCCTCCTGAGTATGCCCCAGTATCGGCCCCGCCCTGCCAATCC TGATGAAATTGGAAACTTCATTGATGAAAACCTGAAGGCAGCTGATAGTGACCCCACTGC CCCACCTTATGACTCTCTGCTGGTGTTTGATTACGAAGGCAGTGGTTCCGAAGCTGCTAG TCTGAGCTCCCTGAACTCCTCGGAGTCGGACCAAGACCAGGACTATGACTACCTGAACGA GTGGGGCAATCGCTTCAAGAAGCTGGCGGACATGTACGGAGGCGGTGAGGACGACTAGGG GACTCCAGACCGATGGCAGAGATGGGTCCCTACGCTCATGTGATGGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 136-406, gnl|bosTau2|chr18 (14221045-14220772) | |
| 136-406, gnl|canFam2|chr5 (83767266-83767019) | |
| 136-406, gnl|danRer3|chr7 (49936820-49936583) | |
| 136-406, gnl|dasNov1|scaffold_22022 (1977-1734) | |
| 136-406, gnl|echTel1|scaffold_287341 (96974-97219) | |
| 136-406, gnl|fr1|chrUn (310167192-310166976) | |
| 136-406, gnl|galGal2|chr11_random (72941-73172) | |
| 136-406, gnl|hg17|chr16 (67424656-67424901) | |
| 136-406, gnl|Hg17|chr16 (67424680-67424941) | |
| 136-406, gnl|loxAfr1|scaffold_19933 (3834-4082) | |
| 136-406, gnl|mm7|chr8 (105267043-105267258) | |
| 136-406, gnl|Mm7|chr8 (105267040-105267294) | |
| 136-406, gnl|monDom2|scaffold_23 (5406060-5405823) | |
| 136-406, gnl|oryCun1|scaffold_168224 (8579-8816) | |
| 136-406, gnl|panTro1|chr18 (61739724-61739969) | |
| 136-406, gnl|rheMac2|chr20 (67194324-67194572) | |
| 136-406, gnl|rn3|chr19 (36515146-36515361) | |
| 136-406, gnl|tetNig1|chrUn_random (31134974-31134740) | |
| 136-406, gnl|xenTro1|scaffold_132 (1576043-1575799) | |
| 158-385, gnl|bosTau2|chr13 (36332808-36332583) | |
| 158-385, gnl|canFam2|chr24 (49110510-49110721) | |
| 158-385, gnl|danRer3|chr15 (29380366-29380155) | |
| 158-385, gnl|dasNov1|scaffold_52742 (9965-9760) | |
| 158-385, gnl|echTel1|scaffold_287341 (97022-97220) | |
| 158-385, gnl|fr1|chrUn (148012371-148012582) | |
| 158-385, gnl|galGal2|chr20 (7378550-7378757) | |
| 158-385, gnl|hg17|chr20 (59945188-59945399) | |
| 158-385, gnl|Hg17|chr20 (59945199-59945429) | |
| 158-385, gnl|loxAfr1|scaffold_19933 (3885-4083) | |
| 158-385, gnl|mm7|chr2 (180396623-180396834) | |
| 158-385, gnl|Mm7|chr2 (180396634-180396858) | |
| 158-385, gnl|monDom2|scaffold_1 (179083825-179084036) | |
| 158-385, gnl|oryCun1|scaffold_175042 (44959-45168) | |
| 158-385, gnl|panTro1|chr21 (62951465-62951676) | |
| 158-385, gnl|rheMac2|chr10 (2593016-2592806) | |
| 158-385, gnl|rn3|chr3 (168885207-168885418) | |
| 158-385, gnl|tetNig1|chr15 (6793696-6793491) | |
| 158-385, gnl|xenTro1|scaffold_220 (321613-321824) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 136-406, gnl|bosTau2|chr18 (14221045-14220772) | |
| 136-406, gnl|canFam2|chr5 (83767266-83767019) | |
| 136-406, gnl|danRer3|chr7 (49936820-49936583) | |
| 136-406, gnl|dasNov1|scaffold_22022 (1977-1734) | |
| 136-406, gnl|echTel1|scaffold_287341 (96974-97219) | |
| 136-406, gnl|fr1|chrUn (310167192-310166976) | |
| 136-406, gnl|galGal2|chr11_random (72941-73172) | |
| 136-406, gnl|hg17|chr16 (67424656-67424901) | |
| 136-406, gnl|Hg17|chr16 (67424680-67424941) | |
| 136-406, gnl|loxAfr1|scaffold_19933 (3834-4082) | |
| 136-406, gnl|mm7|chr8 (105267043-105267258) | |
| 136-406, gnl|Mm7|chr8 (105267040-105267294) | |
| 136-406, gnl|monDom2|scaffold_23 (5406060-5405823) | |
| 136-406, gnl|oryCun1|scaffold_168224 (8579-8816) | |
| 136-406, gnl|panTro1|chr18 (61739724-61739969) | |
| 136-406, gnl|rheMac2|chr20 (67194324-67194572) | |
| 136-406, gnl|rn3|chr19 (36515146-36515361) | |
| 136-406, gnl|tetNig1|chrUn_random (31134974-31134740) | |
| 136-406, gnl|xenTro1|scaffold_132 (1576043-1575799) | |
| 158-385, gnl|bosTau2|chr13 (36332808-36332583) | |
| 158-385, gnl|canFam2|chr24 (49110510-49110721) | |
| 158-385, gnl|danRer3|chr15 (29380366-29380155) | |
| 158-385, gnl|dasNov1|scaffold_52742 (9965-9760) | |
| 158-385, gnl|echTel1|scaffold_287341 (97022-97220) | |
| 158-385, gnl|fr1|chrUn (148012371-148012582) | |
| 158-385, gnl|galGal2|chr20 (7378550-7378757) | |
| 158-385, gnl|hg17|chr20 (59945188-59945399) | |
| 158-385, gnl|Hg17|chr20 (59945199-59945429) | |
| 158-385, gnl|loxAfr1|scaffold_19933 (3885-4083) | |
| 158-385, gnl|mm7|chr2 (180396623-180396834) | |
| 158-385, gnl|Mm7|chr2 (180396634-180396858) | |
| 158-385, gnl|monDom2|scaffold_1 (179083825-179084036) | |
| 158-385, gnl|oryCun1|scaffold_175042 (44959-45168) | |
| 158-385, gnl|panTro1|chr21 (62951465-62951676) | |
| 158-385, gnl|rheMac2|chr10 (2593016-2592806) | |
| 158-385, gnl|rn3|chr3 (168885207-168885418) | |
| 158-385, gnl|tetNig1|chr15 (6793696-6793491) | |
| 158-385, gnl|xenTro1|scaffold_220 (321613-321824) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.383362) | |
| nep (0.183925) | |
| cli (0.152812) |