Ss1.1-Pig1-49J10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACATGCCGGAGATCCGCCTCCGCCATGTGGTGTCCTGCAGTAGCCAGGACTCGACCCA CTGTGCAGAAAACCTTCTCAAGGCAGACACTTATCGAAAATGGCGTGCAGCCAAGGCGGG CGAGAAGACCATCTCTGTGGTTCTCCAGCTGGAGAAGGAGGAGCAGATACACAGCGTGGA CATTGGGAATGATGGCTCAGCCTTTGTGGAGGTGCTGGTGGGCAGCTCGGCCGGAGGGGC TGGGGAGCAAGACTATGAGGTCCTTCTGGTCACCTCATCTTTCATGTCCCCTTCCGAGAG TCGCAGTGGCTCAAACCCCAACCGCGTTCGCATTTTTGGGCCCGACAAGCTGGTCCGGGC AGCAGCAGAGAAGCGCTGGGACCGAGTCAAAATTGTCTGCAGTCAGCCGTACAGCAAGGA TGCCCCCTATGGCCTGAGTTTTATACGGTTTCACAGCCCCCCCGACAAAGACGAGGCCGA GGCCTCATCCCAGAAGGTGACCAGGCTCGGCCAGTTCCGCGTAAAGGAGGAGGATGAGAG CACCAGCTCTCTACAACCGGGAGCGCTCTTCTTCAGCCGGATCAACAGGACACCCCCAGT TGCAGCCAGTGACCCAGCAGGACCCAGCTATGCAGCTGCTACACTGCAGGCCTCCAGTGC AGCCTCCTCGGTGTCTCCGGCCTCCAAGGCAACAGGCAGTGCCTCCAGGGCAGCAGGCAG CACCTCCAAGCCTCAGGAGTCCCCCAAAGGCAAGAGGAAGCTGGATTTGAACCAAGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACATGCCGGAGATCCGCCTCCGCCATGTGGTGTCCTGCAGTAGCCAGGACTCGACCCA CTGTGCAGAAAACCTTCTCAAGGCAGACACTTATCGAAAATGGCGTGCAGCCAAGGCGGG CGAGAAGACCATCTCTGTGGTTCTCCAGCTGGAGAAGGAGGAGCAGATACACAGCGTGGA CATTGGGAATGATGGCTCAGCCTTTGTGGAGGTGCTGGTGGGCAGCTCGGCCGGAGGGGC TGGGGAGCAAGACTATGAGGTCCTTCTGGTCACCTCATCTTTCATGTCCCCTTCCGAGAG TCGCAGTGGCTCAAACCCCAACCGCGTTCGCATTTTTGGGCCCGACAAGCTGGTCCGGGC AGCAGCAGAGAAGCGCTGGGACCGAGTCAAAATTGTCTGCAGTCAGCCGTACAGCAAGGA TGCCCCCTATGGCCTGAGTTTTATACGGTTTCACAGCCCCCCCGACAAAGACGAGGCCGA GGCCTCATCCCAGAAGGTGACCAGGCTCGGCCAGTTCCGCGTAAAGGAGGAGGATGAGAG CACCAGCTCTCTACAACCGGGAGCGCTCTTCTTCAGCCGGATCAACAGGACACCCCCAGT TGCAGCCAGTGACCCAGCAGGACCCAGCTATGCAGCTGCTACACTGCAGGCCTCCAGTGC AGCCTCCTCGGTGTCTCCGGCCTCCAAGGCAACAGGCAGTGCCTCCAGGGCAGCAGGCAG CACCTCCAAGCCTCAGGAGTCCCCCAAAGGCAAGAGGAAGCTGGATTTGAACCAAGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 258-419, gnl|bosTau2|chr18 (46303696-46303857) | |
| 258-419, gnl|canFam2|chr1 (114457408-114457235) | |
| 258-419, gnl|danRer3|chrNA (205925115-205925276) | |
| 258-419, gnl|dasNov1|scaffold_7145 (76433-76249) | |
| 258-419, gnl|echTel1|scaffold_322016 (40166-39991) | |
| 258-419, gnl|fr1|chrUn (279176108-279176278) | |
| 258-419, gnl|hg17|chr19 (48750637-48750814) | |
| 258-419, gnl|Hg17|chr19 (48750802-48750637) | |
| 258-419, gnl|loxAfr1|scaffold_2151 (61409-61590) | |
| 258-419, gnl|mm7|chr7 (21353719-21353542) | |
| 258-419, gnl|Mm7|chr7 (21353556-21353717) | |
| 258-419, gnl|oryCun1|scaffold_199938 (27056-26879) | |
| 258-419, gnl|panTro1|chr20 (45683692-45683869) | |
| 258-419, gnl|rheMac2|chr19 (50007853-50008031) | |
| 258-419, gnl|rn3|chr1 (79930272-79930095) | |
| 258-419, gnl|tetNig1|chrUn_random (22265995-22266157) | |
| 258-419, gnl|xenTro1|scaffold_496 (632961-632783) | |
| 492-602, gnl|bosTau2|chr18 (46304821-46304931) | |
| 492-602, gnl|Hg17|chr19 (48749506-48749390) | |
| 492-602, gnl|Mm7|chr7 (21354409-21354525) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 258-419, gnl|bosTau2|chr18 (46303696-46303857) | |
| 258-419, gnl|canFam2|chr1 (114457408-114457235) | |
| 258-419, gnl|danRer3|chrNA (205925115-205925276) | |
| 258-419, gnl|dasNov1|scaffold_7145 (76433-76249) | |
| 258-419, gnl|echTel1|scaffold_322016 (40166-39991) | |
| 258-419, gnl|fr1|chrUn (279176108-279176278) | |
| 258-419, gnl|hg17|chr19 (48750637-48750814) | |
| 258-419, gnl|Hg17|chr19 (48750802-48750637) | |
| 258-419, gnl|loxAfr1|scaffold_2151 (61409-61590) | |
| 258-419, gnl|mm7|chr7 (21353719-21353542) | |
| 258-419, gnl|Mm7|chr7 (21353556-21353717) | |
| 258-419, gnl|oryCun1|scaffold_199938 (27056-26879) | |
| 258-419, gnl|panTro1|chr20 (45683692-45683869) | |
| 258-419, gnl|rheMac2|chr19 (50007853-50008031) | |
| 258-419, gnl|rn3|chr1 (79930272-79930095) | |
| 258-419, gnl|tetNig1|chrUn_random (22265995-22266157) | |
| 258-419, gnl|xenTro1|scaffold_496 (632961-632783) | |
| 492-602, gnl|bosTau2|chr18 (46304821-46304931) | |
| 492-602, gnl|Hg17|chr19 (48749506-48749390) | |
| 492-602, gnl|Mm7|chr7 (21354409-21354525) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.120048) | |
| jca (0.11396) | |
| eje (0.0988338) |