Non-Coding RNA Search

Ss1.1-Pig1-4P02.5

Sequence:


               
               GGACAACGAGATGAGGCTCCAGCGGTCCGTGTCCGTGCACACTTTCACCAGCTTCTGCAC
GTACGCCTCCTTGAGGGTCAGGGGCGTGATCTTGGCCCGGCTCACGCCCGCGGGCAGGAA
GTCCAGCAAGCAGGCCAGTACCACCTCCTTGGTCAGCTGGAAGGACGCCTCACTGCGCAG
GTCCACGCGGAACACCAAGTCTAGGTCCTTGTAGCCCAGGCCACTCTCGGGATGCAGTAC
GTGGCTGGCGGCCGAGCCGTGCAGCCGCACACTGTGCACGTGCAGTCCCTGCTCCTCCAG
GCTGCTGCGGACCGCCTGCACGATCTGTCGGGGCTGCACGCTCAGCGTGGGGAAGTTGCC
GCGCCCGTGAATGGGAATCGGCTCGCTCAGGAGCGCATCCAGCCTCTTCACCTGCGGCCA
GGCCAGCCTACTCAGGTGACGTCCGAGGGAGGTAGATGAGGCCTCTGGGTCGGGGCCGCC
GCCTATCGGGGCAGCCGTAGCCACCGCCGAAGCCGTAGCCGTCCCCACCTGTGCAGCCGC
CTGGTCCCGGCTCTCGGTTCCGCTCTCCGACGGCATCATTAGCCCGGCCCCAGCGCCCGA
ACGGCAGAAAGCGGGGTCGGGGAGTTGAGGGGAGGAGGGCAGGGAGAGCGGTTGGGCCTG
GGCCAAGGCGGAGGGCGCAGGGACAGGACAGCAGCGACGGCGAGGCAATCCCAGGGCACA
CCTCCGACGGCAAAGGCCAACTGACCCTAAAGCTTGTCGCCCGGGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACAACGAGATGAGGCTCCAGCGGTCCGTGTCCGTGCACACTTTCACCAGCTTCTGCAC
GTACGCCTCCTTGAGGGTCAGGGGCGTGATCTTGGCCCGGCTCACGCCCGCGGGCAGGAA
GTCCAGCAAGCAGGCCAGTACCACCTCCTTGGTCAGCTGGAAGGACGCCTCACTGCGCAG
GTCCACGCGGAACACCAAGTCTAGGTCCTTGTAGCCCAGGCCACTCTCGGGATGCAGTAC
GTGGCTGGCGGCCGAGCCGTGCAGCCGCACACTGTGCACGTGCAGTCCCTGCTCCTCCAG
GCTGCTGCGGACCGCCTGCACGATCTGTCGGGGCTGCACGCTCAGCGTGGGGAAGTTGCC
GCGCCCGTGAATGGGAATCGGCTCGCTCAGGAGCGCATCCAGCCTCTTCACCTGCGGCCA
GGCCAGCCTACTCAGGTGACGTCCGAGGGAGGTAGATGAGGCCTCTGGGTCGGGGCCGCC
GCCTATCGGGGCAGCCGTAGCCACCGCCGAAGCCGTAGCCGTCCCCACCTGTGCAGCCGC
CTGGTCCCGGCTCTCGGTTCCGCTCTCCGACGGCATCATTAGCCCGGCCCCAGCGCCCGA
ACGGCAGAAAGCGGGGTCGGGGAGTTGAGGGGAGGAGGGCAGGGAGAGCGGTTGGGCCTG
GGCCAAGGCGGAGGGCGCAGGGACAGGACAGCAGCGACGGCGAGGCAATCCCAGGGCACA
CCTCCGACGGCAAAGGCCAACTGACCCTAAAGCTTGTCGCCCGGGGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5TDD4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5TDD4_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-320, gnl|bosTau2|chr2 (79340033-79339714)
               

               
               1-320, gnl|Hg17|chr1 (27017276-27017595)
               

               
               1-320, gnl|Mm7|chr4 (132864831-132864512)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-320, gnl|bosTau2|chr2 (79340033-79339714)
               

               
               1-320, gnl|Hg17|chr1 (27017276-27017595)
               

               
               1-320, gnl|Mm7|chr4 (132864831-132864512)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-320, gnl\|bosTau2\|chr2 (79340033-79339714)
	1-320, gnl\|Hg17\|chr1 (27017276-27017595)
	1-320, gnl\|Mm7\|chr4 (132864831-132864512)