Ss1.1-Pig1-50C20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGAGCATTGGGTGCTGCTGGCACTCCTGCCTCCCACCCGATCCCAGCTCTCAGAGCCTC AGCAGACTCTGCACCCTAGGGACCTGCGGGACATTCCCCAGAAAGGGTCATCATGGCCTG CAAGAAGGGGTGCTCCAAGTGGTCCCTTGTCACGGGTGCCTGTGTGGCTCTGGGGTTTGC CGTCATCATGGTCCTGTGCTTCACGCTGCAGAAGCGCACCCAGCCAGGCTGTGTGCAGGC TGCAGCCTGCCGCTCTGACGCAGACATGATGGACTACCTGCTGAGCGTGGGTCAGCTCAG CCAACGGGATGGCCTGCTGGTCACCTGGTACCACGCTGCCAACAGCCAGAAGGAGATGCA GGCAGCCCTCAGCAGTGACATCATGGTCCTGGAGGCAGATGTCACGGTAGAGGGGCTCAA CACAGCCAACGAGACCGGGGTCCCCATCATGGCACACCCCCCAGCCATCTACAGCGACAA CACCCTGCAGCAGTGGCTGGAGACCGTGCTGGCCTCTTCCCAGAAGGGCATCAAGCTGGA TTTCAAGAGCATCAAGGCCGTGGGCCCTGCCCTGGATCTCCTGCGGCGGCTGACGGAGGA GGGGAGAGTTCGGAGGCCTGTATGGATCAATGCCGACATCCTGAGAGGCCCCAACATGCC CATCTCAATAGAGGTCAATGCCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGAGCATTGGGTGCTGCTGGCACTCCTGCCTCCCACCCGATCCCAGCTCTCAGAGCCTC AGCAGACTCTGCACCCTAGGGACCTGCGGGACATTCCCCAGAAAGGGTCATCATGGCCTG CAAGAAGGGGTGCTCCAAGTGGTCCCTTGTCACGGGTGCCTGTGTGGCTCTGGGGTTTGC CGTCATCATGGTCCTGTGCTTCACGCTGCAGAAGCGCACCCAGCCAGGCTGTGTGCAGGC TGCAGCCTGCCGCTCTGACGCAGACATGATGGACTACCTGCTGAGCGTGGGTCAGCTCAG CCAACGGGATGGCCTGCTGGTCACCTGGTACCACGCTGCCAACAGCCAGAAGGAGATGCA GGCAGCCCTCAGCAGTGACATCATGGTCCTGGAGGCAGATGTCACGGTAGAGGGGCTCAA CACAGCCAACGAGACCGGGGTCCCCATCATGGCACACCCCCCAGCCATCTACAGCGACAA CACCCTGCAGCAGTGGCTGGAGACCGTGCTGGCCTCTTCCCAGAAGGGCATCAAGCTGGA TTTCAAGAGCATCAAGGCCGTGGGCCCTGCCCTGGATCTCCTGCGGCGGCTGACGGAGGA GGGGAGAGTTCGGAGGCCTGTATGGATCAATGCCGACATCCTGAGAGGCCCCAACATGCC CATCTCAATAGAGGTCAATGCCAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 4-219, gnl|bosTau2|chr3 (60503121-60503328) | |
| 4-219, gnl|canFam2|chr5 (57502778-57502042) | |
| 4-219, gnl|echTel1|scaffold_57753 (1055-351) | |
| 4-219, gnl|hg17|chr1 (54800973-54801716) | |
| 4-219, gnl|Hg17|chr1 (54801198-54800979) | |
| 4-219, gnl|mm7|chr4 (106110528-106109831) | |
| 4-219, gnl|Mm7|chr4 (106110300-106110519) | |
| 4-219, gnl|oryCun1|scaffold_99308 (3733-4427) | |
| 4-219, gnl|panTro1|chr1 (53084015-53084758) | |
| 4-219, gnl|rheMac2|chr1 (57497112-57497854) | |
| 4-219, gnl|rn3|chr5 (127814483-127813779) | |
| 224-376, gnl|bosTau2|chr3 (60546031-60546183) | |
| 224-376, gnl|Hg17|chr1 (54797705-54797556) | |
| 224-376, gnl|Mm7|chr4 (106111885-106112037) | |
| 513-684, gnl|bosTau2|chr3 (60552348-60552517) | |
| 513-684, gnl|canFam2|chr5 (57508800-57508608) | |
| 513-684, gnl|echTel1|scaffold_234704 (8936-9124) | |
| 513-684, gnl|fr1|chrUn (316846478-316846677) | |
| 513-684, gnl|hg17|chr1 (54792376-54792568) | |
| 513-684, gnl|Hg17|chr1 (54792566-54792397) | |
| 513-684, gnl|mm7|chr4 (106119814-106119623) | |
| 513-684, gnl|Mm7|chr4 (106119623-106119792) | |
| 513-684, gnl|monDom2|scaffold_40 (21371675-21371479) | |
| 513-684, gnl|oryCun1|scaffold_212361 (44730-44922) | |
| 513-684, gnl|panTro1|chr1 (53075572-53075764) | |
| 513-684, gnl|rheMac2|chr1 (57487283-57487475) | |
| 513-684, gnl|rn3|chr5 (127822199-127822008) | |
| 513-684, gnl|xenTro1|scaffold_197 (1162358-1162529) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-219, gnl|bosTau2|chr3 (60503121-60503328) | |
| 4-219, gnl|canFam2|chr5 (57502778-57502042) | |
| 4-219, gnl|echTel1|scaffold_57753 (1055-351) | |
| 4-219, gnl|hg17|chr1 (54800973-54801716) | |
| 4-219, gnl|Hg17|chr1 (54801198-54800979) | |
| 4-219, gnl|mm7|chr4 (106110528-106109831) | |
| 4-219, gnl|Mm7|chr4 (106110300-106110519) | |
| 4-219, gnl|oryCun1|scaffold_99308 (3733-4427) | |
| 4-219, gnl|panTro1|chr1 (53084015-53084758) | |
| 4-219, gnl|rheMac2|chr1 (57497112-57497854) | |
| 4-219, gnl|rn3|chr5 (127814483-127813779) | |
| 224-376, gnl|bosTau2|chr3 (60546031-60546183) | |
| 224-376, gnl|Hg17|chr1 (54797705-54797556) | |
| 224-376, gnl|Mm7|chr4 (106111885-106112037) | |
| 513-684, gnl|bosTau2|chr3 (60552348-60552517) | |
| 513-684, gnl|canFam2|chr5 (57508800-57508608) | |
| 513-684, gnl|echTel1|scaffold_234704 (8936-9124) | |
| 513-684, gnl|fr1|chrUn (316846478-316846677) | |
| 513-684, gnl|hg17|chr1 (54792376-54792568) | |
| 513-684, gnl|Hg17|chr1 (54792566-54792397) | |
| 513-684, gnl|mm7|chr4 (106119814-106119623) | |
| 513-684, gnl|Mm7|chr4 (106119623-106119792) | |
| 513-684, gnl|monDom2|scaffold_40 (21371675-21371479) | |
| 513-684, gnl|oryCun1|scaffold_212361 (44730-44922) | |
| 513-684, gnl|panTro1|chr1 (53075572-53075764) | |
| 513-684, gnl|rheMac2|chr1 (57487283-57487475) | |
| 513-684, gnl|rn3|chr5 (127822199-127822008) | |
| 513-684, gnl|xenTro1|scaffold_197 (1162358-1162529) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) |