Ss1.1-Pig1-51O15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCTAGACCGTGGCGGTGGGACAGAGGAGCTGCCATGGAGCGCCCAGAGCTGGAGGCCA GTTCAGACGACGCTATGGACTCGTTTCTGGAAAAGTTTCAGAGCCAGCCTTACAGCGGCG GCTTCCACGAGGACCAATGGGAGGAGGAATTTGAAAAGATCCCCCTATTTATGAAGAAAG CACCATCAGAAATTGATCCCAAAGAGAATCCTGACTTGGCTTGCCTCCAGTCAATTATTT TTGATGAAGAACGATCTCCAGAAGAACAGGCCAAAACCTATAAAGATGAGGGCAATGATT ACTTTAAAGAAAAAGACTATAAGAAAGCTGTGATTTCTTACACGGAAGGATTAAAGAAGA AATGTGCAGACCCTGATTTGAATGCTGTTCTTTACACCAACCGGGCAGCAGCACAGTATT ACCTGGGCAACTTTCGTTCTGCTCTCAATGATGTGACGGCTGCCAGAAAGCTAAAACCCT GCCACCTCAAAGCGATAGTAAGAGGTGCCCTGTGTCATCTGGAACTGAAAAACTACGGTG AAGCTGTGACTTGGTGTGATGAGGGACTGCAGATAGATGCGACAGAGAAGAAGCTTCTGG AAATGAGGGCAAAAGCAGACAAGTTGAAGCGAACTGAACAGAGGGATATAAGGAAAGCAA AGTTGAAAGAAAAGAAGGAGCAGAATCAGAATGAGGCTTTACTCCAGGCCATCAAGGCTA GGAGCATCAGGCTAGTCTCTGAAGCTGCTGGAGAAGATGAAGATTCAGCCTCAGAAGGTC TTGGTGAGCTTTTCCTGAATGGGCTCAGTTCTGAGAACCCCTATGGAGCCAGGCTGAGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCTAGACCGTGGCGGTGGGACAGAGGAGCTGCCATGGAGCGCCCAGAGCTGGAGGCCA GTTCAGACGACGCTATGGACTCGTTTCTGGAAAAGTTTCAGAGCCAGCCTTACAGCGGCG GCTTCCACGAGGACCAATGGGAGGAGGAATTTGAAAAGATCCCCCTATTTATGAAGAAAG CACCATCAGAAATTGATCCCAAAGAGAATCCTGACTTGGCTTGCCTCCAGTCAATTATTT TTGATGAAGAACGATCTCCAGAAGAACAGGCCAAAACCTATAAAGATGAGGGCAATGATT ACTTTAAAGAAAAAGACTATAAGAAAGCTGTGATTTCTTACACGGAAGGATTAAAGAAGA AATGTGCAGACCCTGATTTGAATGCTGTTCTTTACACCAACCGGGCAGCAGCACAGTATT ACCTGGGCAACTTTCGTTCTGCTCTCAATGATGTGACGGCTGCCAGAAAGCTAAAACCCT GCCACCTCAAAGCGATAGTAAGAGGTGCCCTGTGTCATCTGGAACTGAAAAACTACGGTG AAGCTGTGACTTGGTGTGATGAGGGACTGCAGATAGATGCGACAGAGAAGAAGCTTCTGG AAATGAGGGCAAAAGCAGACAAGTTGAAGCGAACTGAACAGAGGGATATAAGGAAAGCAA AGTTGAAAGAAAAGAAGGAGCAGAATCAGAATGAGGCTTTACTCCAGGCCATCAAGGCTA GGAGCATCAGGCTAGTCTCTGAAGCTGCTGGAGAAGATGAAGATTCAGCCTCAGAAGGTC TTGGTGAGCTTTTCCTGAATGGGCTCAGTTCTGAGAACCCCTATGGAGCCAGGCTGAGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 98 entry(ies) | More info |
| Aligned organism(s): 98 entry(ies) | Help | Less info |
| 35-147, gnl|bosTau2|chr3 (60406164-60406052) | |
| 35-147, gnl|danRer3|chr6 (14387870-14387948) | |
| 35-147, gnl|dasNov1|scaffold_21037 (42271-42352) | |
| 35-147, gnl|echTel1|scaffold_237112 (18252-18333) | |
| 35-147, gnl|fr1|chrUn (247562530-247562608) | |
| 35-147, gnl|Hg17|chr1 (54893602-54893714) | |
| 35-147, gnl|hg17|chr7 (45813507-45813588) | |
| 35-147, gnl|loxAfr1|scaffold_46586 (14796-14874) | |
| 35-147, gnl|mm7|chr4 (106055192-106055273) | |
| 35-147, gnl|Mm7|chr4 (106055303-106055191) | |
| 35-147, gnl|monDom2|scaffold_40 (21271002-21271083) | |
| 35-147, gnl|oryCun1|scaffold_104671 (191-109) | |
| 35-147, gnl|panTro1|chr6 (47290618-47290699) | |
| 35-147, gnl|rheMac2|chr3 (80501947-80501866) | |
| 35-147, gnl|rn3|chr5 (127761184-127761265) | |
| 35-147, gnl|xenTro1|scaffold_197 (1181950-1182031) | |
| 263-433, gnl|bosTau2|chr3 (60404347-60404177) | |
| 263-433, gnl|canFam2|chr5 (57432822-57432633) | |
| 263-433, gnl|canFam2|chr5 (57432638-57432795) | |
| 263-433, gnl|danRer3|chr6 (14386949-14386775) | |
| 263-433, gnl|danRer3|chr6 (14386780-14386937) | |
| 263-433, gnl|dasNov1|scaffold_79998 (6665-6476) | |
| 263-433, gnl|dasNov1|scaffold_79998 (6481-6638) | |
| 263-433, gnl|fr1|chrUn (247562217-247562027) | |
| 263-433, gnl|fr1|chrUn (247562032-247562189) | |
| 263-433, gnl|hg17|chr1 (54895162-54895351) | |
| 263-433, gnl|Hg17|chr1 (54895184-54895354) | |
| 263-433, gnl|hg17|chr7 (45813233-45813390) | |
| 263-433, gnl|loxAfr1|scaffold_46586 (14679-14524) | |
| 263-433, gnl|loxAfr1|scaffold_46586 (14524-14676) | |
| 263-433, gnl|mm7|chr4 (106053222-106053035) | |
| 263-433, gnl|mm7|chr4 (106053040-106053197) | |
| 263-433, gnl|Mm7|chr4 (106053200-106053034) | |
| 263-433, gnl|monDom2|scaffold_40 (21269044-21268855) | |
| 263-433, gnl|monDom2|scaffold_40 (21268860-21269017) | |
| 263-433, gnl|oryCun1|scaffold_173821 (51476-51289) | |
| 263-433, gnl|oryCun1|scaffold_173821 (51294-51452) | |
| 263-433, gnl|panTro1|chr1 (53182708-53182897) | |
| 263-433, gnl|panTro1|chr6 (47290344-47290501) | |
| 263-433, gnl|rheMac2|chr1 (57586528-57586717) | |
| 263-433, gnl|rheMac2|chr3 (80502224-80502067) | |
| 263-433, gnl|rn3|chr5 (127759146-127758959) | |
| 263-433, gnl|rn3|chr5 (127758964-127759121) | |
| 263-433, gnl|tetNig1|chr1 (15670595-15670768) | |
| 263-433, gnl|tetNig1|chr1 (15670763-15670606) | |
| 263-433, gnl|xenTro1|scaffold_197 (1180794-1180624) | |
| 263-433, gnl|xenTro1|scaffold_197 (1180629-1180786) | |
| 503-629, gnl|bosTau2|chr3 (60398539-60398413) | |
| 503-629, gnl|canFam2|chr5 (57426777-57426643) | |
| 503-629, gnl|canFam2|chr5 (57426645-57426767) | |
| 503-629, gnl|danRer3|chr6 (14385844-14385710) | |
| 503-629, gnl|danRer3|chr6 (14385709-14385822) | |
| 503-629, gnl|dasNov1|scaffold_79998 (3457-3324) | |
| 503-629, gnl|dasNov1|scaffold_79998 (3327-3447) | |
| 503-629, gnl|echTel1|scaffold_237112 (10058-9924) | |
| 503-629, gnl|echTel1|scaffold_237112 (9928-10047) | |
| 503-629, gnl|fr1|chrUn (247561770-247561636) | |
| 503-629, gnl|fr1|chrUn (247561643-247561752) | |
| 503-629, gnl|hg17|chr1 (54900362-54900496) | |
| 503-629, gnl|Hg17|chr1 (54900367-54900493) | |
| 503-629, gnl|hg17|chr7 (45813025-45813150) | |
| 503-629, gnl|loxAfr1|scaffold_98145 (5292-5190) | |
| 503-629, gnl|loxAfr1|scaffold_98145 (5194-5292) | |
| 503-629, gnl|mm7|chr4 (106048196-106048062) | |
| 503-629, gnl|mm7|chr4 (106048064-106048185) | |
| 503-629, gnl|Mm7|chr4 (106048189-106048063) | |
| 503-629, gnl|monDom2|scaffold_40 (21267073-21266944) | |
| 503-629, gnl|monDom2|scaffold_40 (21266946-21267067) | |
| 503-629, gnl|oryCun1|scaffold_203847 (89340-89206) | |
| 503-629, gnl|oryCun1|scaffold_203847 (89210-89329) | |
| 503-629, gnl|panTro1|chr1 (53187892-53188026) | |
| 503-629, gnl|panTro1|chr6 (47290136-47290261) | |
| 503-629, gnl|rheMac2|chr1 (57591854-57591988) | |
| 503-629, gnl|rheMac2|chr3 (80502428-80502304) | |
| 503-629, gnl|rn3|chr5 (127755041-127754907) | |
| 503-629, gnl|rn3|chr5 (127754909-127755030) | |
| 503-629, gnl|tetNig1|chr1 (15671043-15671177) | |
| 503-629, gnl|tetNig1|chr1 (15671170-15671061) | |
| 503-629, gnl|xenTro1|scaffold_197 (1178140-1178010) | |
| 503-629, gnl|xenTro1|scaffold_197 (1178008-1178130) | |
| 710-840, gnl|bosTau2|chr3 (60391521-60391391) | |
| 710-840, gnl|canFam2|chr5 (57415242-57415467) | |
| 710-840, gnl|danRer3|chr6 (14382730-14382931) | |
| 710-840, gnl|dasNov1|scaffold_74360 (1582-1800) | |
| 710-840, gnl|echTel1|scaffold_237112 (6894-7119) | |
| 710-840, gnl|fr1|chrUn (247561167-247561465) | |
| 710-840, gnl|Hg17|chr1 (54909173-54909300) | |
| 710-840, gnl|hg17|chr7 (45812727-45812949) | |
| 710-840, gnl|loxAfr1|scaffold_7811 (29717-29937) | |
| 710-840, gnl|mm7|chr4 (106044475-106044700) | |
| 710-840, gnl|Mm7|chr4 (106044700-106044570) | |
| 710-840, gnl|monDom2|scaffold_40 (21265317-21265551) | |
| 710-840, gnl|oryCun1|scaffold_210266 (5031-5256) | |
| 710-840, gnl|panTro1|chr6 (47289838-47290060) | |
| 710-840, gnl|rheMac2|chr3 (80502752-80502504) | |
| 710-840, gnl|rn3|chr5 (127751331-127751556) | |
| 710-840, gnl|tetNig1|chr1 (15671648-15671437) | |
| 710-840, gnl|xenTro1|scaffold_197 (1176392-1176602) |
| Aligned organism(s): 98 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-147, gnl|bosTau2|chr3 (60406164-60406052) | |
| 35-147, gnl|danRer3|chr6 (14387870-14387948) | |
| 35-147, gnl|dasNov1|scaffold_21037 (42271-42352) | |
| 35-147, gnl|echTel1|scaffold_237112 (18252-18333) | |
| 35-147, gnl|fr1|chrUn (247562530-247562608) | |
| 35-147, gnl|Hg17|chr1 (54893602-54893714) | |
| 35-147, gnl|hg17|chr7 (45813507-45813588) | |
| 35-147, gnl|loxAfr1|scaffold_46586 (14796-14874) | |
| 35-147, gnl|mm7|chr4 (106055192-106055273) | |
| 35-147, gnl|Mm7|chr4 (106055303-106055191) | |
| 35-147, gnl|monDom2|scaffold_40 (21271002-21271083) | |
| 35-147, gnl|oryCun1|scaffold_104671 (191-109) | |
| 35-147, gnl|panTro1|chr6 (47290618-47290699) | |
| 35-147, gnl|rheMac2|chr3 (80501947-80501866) | |
| 35-147, gnl|rn3|chr5 (127761184-127761265) | |
| 35-147, gnl|xenTro1|scaffold_197 (1181950-1182031) | |
| 263-433, gnl|bosTau2|chr3 (60404347-60404177) | |
| 263-433, gnl|canFam2|chr5 (57432822-57432633) | |
| 263-433, gnl|canFam2|chr5 (57432638-57432795) | |
| 263-433, gnl|danRer3|chr6 (14386949-14386775) | |
| 263-433, gnl|danRer3|chr6 (14386780-14386937) | |
| 263-433, gnl|dasNov1|scaffold_79998 (6665-6476) | |
| 263-433, gnl|dasNov1|scaffold_79998 (6481-6638) | |
| 263-433, gnl|fr1|chrUn (247562217-247562027) | |
| 263-433, gnl|fr1|chrUn (247562032-247562189) | |
| 263-433, gnl|hg17|chr1 (54895162-54895351) | |
| 263-433, gnl|Hg17|chr1 (54895184-54895354) | |
| 263-433, gnl|hg17|chr7 (45813233-45813390) | |
| 263-433, gnl|loxAfr1|scaffold_46586 (14679-14524) | |
| 263-433, gnl|loxAfr1|scaffold_46586 (14524-14676) | |
| 263-433, gnl|mm7|chr4 (106053222-106053035) | |
| 263-433, gnl|mm7|chr4 (106053040-106053197) | |
| 263-433, gnl|Mm7|chr4 (106053200-106053034) | |
| 263-433, gnl|monDom2|scaffold_40 (21269044-21268855) | |
| 263-433, gnl|monDom2|scaffold_40 (21268860-21269017) | |
| 263-433, gnl|oryCun1|scaffold_173821 (51476-51289) | |
| 263-433, gnl|oryCun1|scaffold_173821 (51294-51452) | |
| 263-433, gnl|panTro1|chr1 (53182708-53182897) | |
| 263-433, gnl|panTro1|chr6 (47290344-47290501) | |
| 263-433, gnl|rheMac2|chr1 (57586528-57586717) | |
| 263-433, gnl|rheMac2|chr3 (80502224-80502067) | |
| 263-433, gnl|rn3|chr5 (127759146-127758959) | |
| 263-433, gnl|rn3|chr5 (127758964-127759121) | |
| 263-433, gnl|tetNig1|chr1 (15670595-15670768) | |
| 263-433, gnl|tetNig1|chr1 (15670763-15670606) | |
| 263-433, gnl|xenTro1|scaffold_197 (1180794-1180624) | |
| 263-433, gnl|xenTro1|scaffold_197 (1180629-1180786) | |
| 503-629, gnl|bosTau2|chr3 (60398539-60398413) | |
| 503-629, gnl|canFam2|chr5 (57426777-57426643) | |
| 503-629, gnl|canFam2|chr5 (57426645-57426767) | |
| 503-629, gnl|danRer3|chr6 (14385844-14385710) | |
| 503-629, gnl|danRer3|chr6 (14385709-14385822) | |
| 503-629, gnl|dasNov1|scaffold_79998 (3457-3324) | |
| 503-629, gnl|dasNov1|scaffold_79998 (3327-3447) | |
| 503-629, gnl|echTel1|scaffold_237112 (10058-9924) | |
| 503-629, gnl|echTel1|scaffold_237112 (9928-10047) | |
| 503-629, gnl|fr1|chrUn (247561770-247561636) | |
| 503-629, gnl|fr1|chrUn (247561643-247561752) | |
| 503-629, gnl|hg17|chr1 (54900362-54900496) | |
| 503-629, gnl|Hg17|chr1 (54900367-54900493) | |
| 503-629, gnl|hg17|chr7 (45813025-45813150) | |
| 503-629, gnl|loxAfr1|scaffold_98145 (5292-5190) | |
| 503-629, gnl|loxAfr1|scaffold_98145 (5194-5292) | |
| 503-629, gnl|mm7|chr4 (106048196-106048062) | |
| 503-629, gnl|mm7|chr4 (106048064-106048185) | |
| 503-629, gnl|Mm7|chr4 (106048189-106048063) | |
| 503-629, gnl|monDom2|scaffold_40 (21267073-21266944) | |
| 503-629, gnl|monDom2|scaffold_40 (21266946-21267067) | |
| 503-629, gnl|oryCun1|scaffold_203847 (89340-89206) | |
| 503-629, gnl|oryCun1|scaffold_203847 (89210-89329) | |
| 503-629, gnl|panTro1|chr1 (53187892-53188026) | |
| 503-629, gnl|panTro1|chr6 (47290136-47290261) | |
| 503-629, gnl|rheMac2|chr1 (57591854-57591988) | |
| 503-629, gnl|rheMac2|chr3 (80502428-80502304) | |
| 503-629, gnl|rn3|chr5 (127755041-127754907) | |
| 503-629, gnl|rn3|chr5 (127754909-127755030) | |
| 503-629, gnl|tetNig1|chr1 (15671043-15671177) | |
| 503-629, gnl|tetNig1|chr1 (15671170-15671061) | |
| 503-629, gnl|xenTro1|scaffold_197 (1178140-1178010) | |
| 503-629, gnl|xenTro1|scaffold_197 (1178008-1178130) | |
| 710-840, gnl|bosTau2|chr3 (60391521-60391391) | |
| 710-840, gnl|canFam2|chr5 (57415242-57415467) | |
| 710-840, gnl|danRer3|chr6 (14382730-14382931) | |
| 710-840, gnl|dasNov1|scaffold_74360 (1582-1800) | |
| 710-840, gnl|echTel1|scaffold_237112 (6894-7119) | |
| 710-840, gnl|fr1|chrUn (247561167-247561465) | |
| 710-840, gnl|Hg17|chr1 (54909173-54909300) | |
| 710-840, gnl|hg17|chr7 (45812727-45812949) | |
| 710-840, gnl|loxAfr1|scaffold_7811 (29717-29937) | |
| 710-840, gnl|mm7|chr4 (106044475-106044700) | |
| 710-840, gnl|Mm7|chr4 (106044700-106044570) | |
| 710-840, gnl|monDom2|scaffold_40 (21265317-21265551) | |
| 710-840, gnl|oryCun1|scaffold_210266 (5031-5256) | |
| 710-840, gnl|panTro1|chr6 (47289838-47290060) | |
| 710-840, gnl|rheMac2|chr3 (80502752-80502504) | |
| 710-840, gnl|rn3|chr5 (127751331-127751556) | |
| 710-840, gnl|tetNig1|chr1 (15671648-15671437) | |
| 710-840, gnl|xenTro1|scaffold_197 (1176392-1176602) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |