Non-Coding RNA Search

Ss1.1-Pig1-52F18.5

Sequence:


               
               CAGCGGTGGCGGCCTTGGACGGAGTCAGGTCAGCCCCATGGCTGGTACACGTGATTCAAA
TGAGACTTCCTATTTGCTACCTCCAGACAGCAAGGACTGGGAAGGGCATGGCATTCCCGA
TTTTGTCTACAGGCAGAAGGAACTTGTACCAGAAGGGATTCAGTGGCCAAAGAATGCACC
CAGCCTCCTGGACACACTGCCACTGTCTCGCTTCGACTCTGCGCTCTGCTCGGCCTGGAG
GCAGCGGATGGAGCTGGGCCTGTTCCGTTACCACCTTGGGGAGCTGCAGACCCAAACCCT
CCCTGGTGCTGTGGGGTTCGTTGCTCAGCTGAATGTGGAGCGAGGTGTGCAGAGAAGGCG
CCCCCAAAACATCAGGAGCGTGAGGCAAGCGTTTGACCCGGAGCAGTTTAACTTCAACCA
GATCCGGCCAGGAGAAGTCCTCTTCCGCTTGCACCCAGCCCCGATCCCCGGTGCCCTCCA
GCAAGAGGATATCCTCGTGGTGATCAACGTCAGCCCCCTGGAGTGGGGCCACGTGCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCGGTGGCGGCCTTGGACGGAGTCAGGTCAGCCCCATGGCTGGTACACGTGATTCAAA
TGAGACTTCCTATTTGCTACCTCCAGACAGCAAGGACTGGGAAGGGCATGGCATTCCCGA
TTTTGTCTACAGGCAGAAGGAACTTGTACCAGAAGGGATTCAGTGGCCAAAGAATGCACC
CAGCCTCCTGGACACACTGCCACTGTCTCGCTTCGACTCTGCGCTCTGCTCGGCCTGGAG
GCAGCGGATGGAGCTGGGCCTGTTCCGTTACCACCTTGGGGAGCTGCAGACCCAAACCCT
CCCTGGTGCTGTGGGGTTCGTTGCTCAGCTGAATGTGGAGCGAGGTGTGCAGAGAAGGCG
CCCCCAAAACATCAGGAGCGTGAGGCAAGCGTTTGACCCGGAGCAGTTTAACTTCAACCA
GATCCGGCCAGGAGAAGTCCTCTTCCGCTTGCACCCAGCCCCGATCCCCGGTGCCCTCCA
GCAAGAGGATATCCTCGTGGTGATCAACGTCAGCCCCCTGGAGTGGGGCCACGTGCTGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61554511|gb|AAX46570.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61554511|gb|AAX46570.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               25-540, gnl|bosTau2|chr21 (16228526-16228008)
               

               
               25-540, gnl|Hg17|chr15 (88585132-88585650)
               

               
               25-540, gnl|Mm7|chr7 (76106214-76106735)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-540, gnl|bosTau2|chr21 (16228526-16228008)
               

               
               25-540, gnl|Hg17|chr15 (88585132-88585650)
               

               
               25-540, gnl|Mm7|chr7 (76106214-76106735)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	25-540, gnl\|bosTau2\|chr21 (16228526-16228008)
	25-540, gnl\|Hg17\|chr15 (88585132-88585650)
	25-540, gnl\|Mm7\|chr7 (76106214-76106735)