Non-Coding RNA Search

Ss1.1-Pig1-52K08.5

Sequence:


               
               GCTTTGAAAAGAAGTCCGATCCAGGGGTGCGGGTAACTGATAACATGCTCTGTGCAGGTT
TAGAAAGTGGGGGCAAGGACAGCTGTAAAGGCGACAGTGGGGGAGCATTAGTGTTTCTAG
ATGATGAGACACAGAAGTGGTTTGTGGGAGGAATAGTGTCCTGGAGTTCCACTAATTGTG
GGGAAGCAGGTCAATATGGGGTCTACACAAAAGTCATTAACTATATTCCTTGGATCAACA
ACATAATTAATAATTTTTAAATCCAATCAACAAATGATCCCTTGTTTTAAAAAATCATCT
TTAAAGACCTTAGCAGCAAACTGACCTGAAAAACATTAACATGACAGCTGCCATTCCACT
CCAAAACCAAACCAAAGTATAGGCGAGATTGCCTTTCAGGTACTTCTCCAACTTGCTGGG
TTTTCACCGCTTATTCTTTGATTTAAGGGGACCTAAACCAGTGAGGTGATATTCACCTTT
ACCAACCCAATAGCAGCTCATTGGTTAAATGTGTATTTACTTACAAAGTCCAGTGTCTTT
TTGTCCTTGTGCCTTTCTGTAAACTGCCTGTTCATATTAACTATTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTGAAAAGAAGTCCGATCCAGGGGTGCGGGTAACTGATAACATGCTCTGTGCAGGTT
TAGAAAGTGGGGGCAAGGACAGCTGTAAAGGCGACAGTGGGGGAGCATTAGTGTTTCTAG
ATGATGAGACACAGAAGTGGTTTGTGGGAGGAATAGTGTCCTGGAGTTCCACTAATTGTG
GGGAAGCAGGTCAATATGGGGTCTACACAAAAGTCATTAACTATATTCCTTGGATCAACA
ACATAATTAATAATTTTTAAATCCAATCAACAAATGATCCCTTGTTTTAAAAAATCATCT
TTAAAGACCTTAGCAGCAAACTGACCTGAAAAACATTAACATGACAGCTGCCATTCCACT
CCAAAACCAAACCAAAGTATAGGCGAGATTGCCTTTCAGGTACTTCTCCAACTTGCTGGG
TTTTCACCGCTTATTCTTTGATTTAAGGGGACCTAAACCAGTGAGGTGATATTCACCTTT
ACCAACCCAATAGCAGCTCATTGGTTAAATGTGTATTTACTTACAAAGTCCAGTGTCTTT
TTGTCCTTGTGCCTTTCTGTAAACTGCCTGTTCATATTAACTATTATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-578, gnl|bosTau2|chr16 (22285693-22286285)
               

               
               6-578, gnl|Hg17|chr1 (11021462-11020873)
               

               
               6-578, gnl|Mm7|chr4 (147603812-147604323)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-578, gnl|bosTau2|chr16 (22285693-22286285)
               

               
               6-578, gnl|Hg17|chr1 (11021462-11020873)
               

               
               6-578, gnl|Mm7|chr4 (147603812-147604323)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	6-578, gnl\|bosTau2\|chr16 (22285693-22286285)
	6-578, gnl\|Hg17\|chr1 (11021462-11020873)
	6-578, gnl\|Mm7\|chr4 (147603812-147604323)