Non-Coding RNA Search

Ss1.1-Pig1-52K16.5

Sequence:


               
               TTTAAATTTATTGATTTATTTCGACAGAGTCGCCTGGAATGTTTTATCTTCTGAAGCTTA
CAAATGTACTGTTTGTTCAGATCATGATTTGTTTCACATTTGTTGGAATTCACCTTATTA
GTGACTAAGTAATAAAATCTCTAAGGTATTTTGTTGTATGAAAGGCCTAAAAGATATTTT
GTTGTATATGTATATTAATTTTTAAAGTATATATGAATTCATGAAGTGTGTTCTGTGAAT
TGTCATGTTGCAAATTTTAAATCATGCACTGATGAATTTAATTATGATTTATTTTTCCCC
AATTTTGCTTTTATTTCTATAATTTCATATAAATAATATACCTTATTCCTAGCTTAGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAATTTATTGATTTATTTCGACAGAGTCGCCTGGAATGTTTTATCTTCTGAAGCTTA
CAAATGTACTGTTTGTTCAGATCATGATTTGTTTCACATTTGTTGGAATTCACCTTATTA
GTGACTAAGTAATAAAATCTCTAAGGTATTTTGTTGTATGAAAGGCCTAAAAGATATTTT
GTTGTATATGTATATTAATTTTTAAAGTATATATGAATTCATGAAGTGTGTTCTGTGAAT
TGTCATGTTGCAAATTTTAAATCATGCACTGATGAATTTAATTATGATTTATTTTTCCCC
AATTTTGCTTTTATTTCTATAATTTCATATAAATAATATACCTTATTCCTAGCTTAGTTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-358, gnl|bosTau2|chr21 (8023794-8024170)
               

               
               1-358, gnl|Hg17|chr15 (91246381-91246722)
               

               
               1-358, gnl|Mm7|chr7 (69392697-69392367)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-358, gnl|bosTau2|chr21 (8023794-8024170)
               

               
               1-358, gnl|Hg17|chr15 (91246381-91246722)
               

               
               1-358, gnl|Mm7|chr7 (69392697-69392367)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               bfe (0.299715)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.299715)
               

               
               lin (0.145603)

	1-358, gnl\|bosTau2\|chr21 (8023794-8024170)
	1-358, gnl\|Hg17\|chr15 (91246381-91246722)
	1-358, gnl\|Mm7\|chr7 (69392697-69392367)