Ss1.1-Pig1-52L03.5
               |  | ACAAACAGGCTTAGCGCTCTATTGAAATGCGTGAGGCTCCTTAACTCTTGTATAAACAGA
AACCAGCTGTAACTTTAGGTCAGAGCGCATTAAAATGAGACACTTCTGAACCAGCAGCGA
GCGCCCAGGCCCCAGGCCCTGCTGCTAAGGCCCCGGCAAAGGTCAGGGCTTGGTCCGCGT
GACGTTCCTCTCCTTGCTCGTTCCAGCGGTGCTCGGCCTCAGAGTTCGGGTAACAGAGGC
ATCAGGACGCTTTGCATCAAGTCACCTACCAGTGATCAGCCATTCCTGGGCTCACTGAGG
AGGTTTGGATTTGCCTCAAAGAGCACTCCAAAATTTGAACTGAGAAATCCCAAGGAAGCT
GCCTGGATTTCCCTGTATATTCTTATTCTACATCGTGAAAAGGACCAGACGAATCAAATT
GGTGGCTTTTGCTTTCCTCCAACCGTGGATGCCTTTGACATTATGACCGCAGAGGATTCC
ACCGCAGCCATGAGCAGCGACTCCGCCGCTGGATCCTCGGCCAAGGTGCCCGAGGGCGTG
GCGGGCGCGCCCAACGAGGCTGCGCTGCTGGCGCTGATGGAGCGCACTCCAACGGTATAA
ATCCTTATTTCTTTGTTCAGTTTGTATCTTTGTGGCCCAAGAGGAAGAACTGCTGCTGCT
GATATGTGAGCATCTTAGGAACAGAGTTAATAACTGCGTATTGTTTATAAATCTGTCTTC
CTCACCATCCCCCACCCCCCAAAAGGACAAAATATTTCAGCCAGCTGTCTTTTGAAATTT
TGGATGCAAGGAAGGCTCCTTTGTACAAGCCAGAACAATCCTTAGGTTTCTTGAACAATC
CCTTAGGGCTTCTCTCATTTCTGTTGCTTCCCTTGT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | ACAAACAGGCTTAGCGCTCTATTGAAATGCGTGAGGCTCCTTAACTCTTGTATAAACAGA
AACCAGCTGTAACTTTAGGTCAGAGCGCATTAAAATGAGACACTTCTGAACCAGCAGCGA
GCGCCCAGGCCCCAGGCCCTGCTGCTAAGGCCCCGGCAAAGGTCAGGGCTTGGTCCGCGT
GACGTTCCTCTCCTTGCTCGTTCCAGCGGTGCTCGGCCTCAGAGTTCGGGTAACAGAGGC
ATCAGGACGCTTTGCATCAAGTCACCTACCAGTGATCAGCCATTCCTGGGCTCACTGAGG
AGGTTTGGATTTGCCTCAAAGAGCACTCCAAAATTTGAACTGAGAAATCCCAAGGAAGCT
GCCTGGATTTCCCTGTATATTCTTATTCTACATCGTGAAAAGGACCAGACGAATCAAATT
GGTGGCTTTTGCTTTCCTCCAACCGTGGATGCCTTTGACATTATGACCGCAGAGGATTCC
ACCGCAGCCATGAGCAGCGACTCCGCCGCTGGATCCTCGGCCAAGGTGCCCGAGGGCGTG
GCGGGCGCGCCCAACGAGGCTGCGCTGCTGGCGCTGATGGAGCGCACTCCAACGGTATAA
ATCCTTATTTCTTTGTTCAGTTTGTATCTTTGTGGCCCAAGAGGAAGAACTGCTGCTGCT
GATATGTGAGCATCTTAGGAACAGAGTTAATAACTGCGTATTGTTTATAAATCTGTCTTC
CTCACCATCCCCCACCCCCCAAAAGGACAAAATATTTCAGCCAGCTGTCTTTTGAAATTT
TGGATGCAAGGAAGGCTCCTTTGTACAAGCCAGAACAATCCTTAGGTTTCTTGAACAATC
CCTTAGGGCTTCTCTCATTTCTGTTGCTTCCCTTGT | 
               |  | 58-222, gnl|bosTau2|chr6 (31457473-31457315) | 
               |  | 58-222, gnl|canFam2|chr3 (74811501-74811012) | 
               |  | 58-222, gnl|dasNov1|scaffold_44508 (8638-9094) | 
               |  | 58-222, gnl|hg17|chr4 (40473123-40473600) | 
               |  | 58-222, gnl|Hg17|chr4 (40473568-40473408) | 
               |  | 58-222, gnl|mm7|chr5 (65506183-65506662) | 
               |  | 58-222, gnl|Mm7|chr5 (65506632-65506468) | 
               |  | 58-222, gnl|monDom2|scaffold_26 (5841203-5841766) | 
               |  | 58-222, gnl|oryCun1|scaffold_191694 (10678-11108) | 
               |  | 58-222, gnl|panTro1|chr3 (43153015-43153492) | 
               |  | 58-222, gnl|rheMac2|chr5 (35660523-35660986) | 
               |  | 58-222, gnl|rn3|chr14 (44707521-44707050) | 
| 
 |  | 
               |  | 304-431, gnl|bosTau2|chr6 (31275221-31275094) | 
               |  | 304-431, gnl|Hg17|chr4 (40309648-40309522) | 
               |  | 304-431, gnl|Mm7|chr5 (65401028-65400898) | 
| 
 |  | 
               |  | 435-587, gnl|bosTau2|chr6 (31252928-31252776) | 
               |  | 435-587, gnl|Hg17|chr4 (40281866-40281714) | 
               |  | 435-587, gnl|Mm7|chr5 (65382097-65381945) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 58-222, gnl|bosTau2|chr6 (31457473-31457315) | 
               |  | 58-222, gnl|canFam2|chr3 (74811501-74811012) | 
               |  | 58-222, gnl|dasNov1|scaffold_44508 (8638-9094) | 
               |  | 58-222, gnl|hg17|chr4 (40473123-40473600) | 
               |  | 58-222, gnl|Hg17|chr4 (40473568-40473408) | 
               |  | 58-222, gnl|mm7|chr5 (65506183-65506662) | 
               |  | 58-222, gnl|Mm7|chr5 (65506632-65506468) | 
               |  | 58-222, gnl|monDom2|scaffold_26 (5841203-5841766) | 
               |  | 58-222, gnl|oryCun1|scaffold_191694 (10678-11108) | 
               |  | 58-222, gnl|panTro1|chr3 (43153015-43153492) | 
               |  | 58-222, gnl|rheMac2|chr5 (35660523-35660986) | 
               |  | 58-222, gnl|rn3|chr14 (44707521-44707050) | 
| 
 |  | 
               |  | 304-431, gnl|bosTau2|chr6 (31275221-31275094) | 
               |  | 304-431, gnl|Hg17|chr4 (40309648-40309522) | 
               |  | 304-431, gnl|Mm7|chr5 (65401028-65400898) | 
| 
 |  | 
               |  | 435-587, gnl|bosTau2|chr6 (31252928-31252776) | 
               |  | 435-587, gnl|Hg17|chr4 (40281866-40281714) | 
               |  | 435-587, gnl|Mm7|chr5 (65382097-65381945) | 
               |  | cki (0.165235) | 
               |  | clu (0.119646) | 
               |  | cki (0.165235) | 
               |  | clu (0.119646) |