Non-Coding RNA Search

Ss1.1-Pig1-53B24.5

Sequence:


               
               GCTTAGGTTTAGGAATCTAGTACAGCTATTAAGGGGCCTAGATGGCGAGAGTGTGATGCC
TAATTAGAAGTTTTTCGGTTGTTTCACGAAATTCAATTCAGGGTGATACTTGGAGCTTTG
GCGAAGGGGCGGGGGGTCTCTTTATTATCTCTGGAGAAAACTAGTTCTTACCAGTCTTAG
ACTTGGTAAAATATACTTTGCTCACTTGAAAGTTGCTTATTCCAAATTATCTTTTCCTCC
CTTTGCATTATTCCCTACAGGATGGTTGTGACTTTGTGTGCCGATCTAAACCCCGAAATG
TGCCTGCTGCATACCGTGGTGTGGGGGATGACCAGCTGGGGGAGGAGTCAGAAGAAAGGG
ATGACCATTTATTACCGATGTGATTGCACTTTAAACGTCCAGCTTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTAGGTTTAGGAATCTAGTACAGCTATTAAGGGGCCTAGATGGCGAGAGTGTGATGCC
TAATTAGAAGTTTTTCGGTTGTTTCACGAAATTCAATTCAGGGTGATACTTGGAGCTTTG
GCGAAGGGGCGGGGGGTCTCTTTATTATCTCTGGAGAAAACTAGTTCTTACCAGTCTTAG
ACTTGGTAAAATATACTTTGCTCACTTGAAAGTTGCTTATTCCAAATTATCTTTTCCTCC
CTTTGCATTATTCCCTACAGGATGGTTGTGACTTTGTGTGCCGATCTAAACCCCGAAATG
TGCCTGCTGCATACCGTGGTGTGGGGGATGACCAGCTGGGGGAGGAGTCAGAAGAAAGGG
ATGACCATTTATTACCGATGTGATTGCACTTTAAACGTCCAGCTTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               137-408, gnl|bosTau2|chr5 (59532789-59533050)
               

               
               137-408, gnl|Hg17|chr12 (8985919-8985655)
               

               
               137-408, gnl|Mm7|chr6 (122342339-122342571)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               137-408, gnl|bosTau2|chr5 (59532789-59533050)
               

               
               137-408, gnl|Hg17|chr12 (8985919-8985655)
               

               
               137-408, gnl|Mm7|chr6 (122342339-122342571)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nlu (0.191681)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               spl (0.143184)

	137-408, gnl\|bosTau2\|chr5 (59532789-59533050)
	137-408, gnl\|Hg17\|chr12 (8985919-8985655)
	137-408, gnl\|Mm7\|chr6 (122342339-122342571)