Non-Coding RNA Search

Ss1.1-Pig1-54F06.5

Sequence:


               
               GTAAATACAAGAATTATTCCTTTAATAAGATTGATGTTTTCAAAAGCAGGTATATTCCCG
ATTTCCTGGAAACAAAGAAGACGCTAACAGTATAGCTTGCAAGTGCAATGCTTATTCTGG
CTTAAAAAGAAGATAGGCCAGATTTGAGCATACCTTCTGCGGTGACTAATCGTAGAGACT
GACCGTCTCTGACTGTGCTGGGGTTTTATTACTCGAGGCATACTCTTCACCAGGCCTTAT
TAGAGACAACTGTGCTAGTGGGCATGCTGCTCAGCCTGCTTCATGCCAGTCCATTAGAAA
ATTAGTTCCAGATCCTGAAGAAGATAATCATCCAGGCAGTAGATTTTGTGCTCTTTTCAC
TGAGAGGGAAACTTTTTAAAGAAACATGCTGTAGTAGGAAGAATGTGAACTTTGAGTCAG
ATTACCTGCATATAAATCCTACCTTTTCTAGGAACTGTGACCTTTAAAAAGTTATATAAT
GGTTCTGAGACAGTTTTTTTTTTTTATCTACTTAAAAGGAATAATAATTCCTAGAGCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAATACAAGAATTATTCCTTTAATAAGATTGATGTTTTCAAAAGCAGGTATATTCCCG
ATTTCCTGGAAACAAAGAAGACGCTAACAGTATAGCTTGCAAGTGCAATGCTTATTCTGG
CTTAAAAAGAAGATAGGCCAGATTTGAGCATACCTTCTGCGGTGACTAATCGTAGAGACT
GACCGTCTCTGACTGTGCTGGGGTTTTATTACTCGAGGCATACTCTTCACCAGGCCTTAT
TAGAGACAACTGTGCTAGTGGGCATGCTGCTCAGCCTGCTTCATGCCAGTCCATTAGAAA
ATTAGTTCCAGATCCTGAAGAAGATAATCATCCAGGCAGTAGATTTTGTGCTCTTTTCAC
TGAGAGGGAAACTTTTTAAAGAAACATGCTGTAGTAGGAAGAATGTGAACTTTGAGTCAG
ATTACCTGCATATAAATCCTACCTTTTCTAGGAACTGTGACCTTTAAAAAGTTATATAAT
GGTTCTGAGACAGTTTTTTTTTTTTATCTACTTAAAAGGAATAATAATTCCTAGAGCTGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-540, gnl|bosTau2|chr19 (40117680-40118201)
               

               
               3-540, gnl|Hg17|chr17 (58787373-58787911)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-540, gnl|bosTau2|chr19 (40117680-40118201)
               

               
               3-540, gnl|Hg17|chr17 (58787373-58787911)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	3-540, gnl\|bosTau2\|chr19 (40117680-40118201)
	3-540, gnl\|Hg17\|chr17 (58787373-58787911)