Non-Coding RNA Search

Ss1.1-Pig1-54P07.5

Sequence:


               
               GCTTTTCGCAGCCGCTGCGTCGTTTGGCGCTGCACGTGCTGAGTGCCACGCAGGCCGAAA
GGCTGGCCCGGACAGAGGAGGCTGCTCCTGTCGCACCGCCAGGACCCAAGCTCTGGTACA
GGGACTTCCTGCAGCTGGTGGAGCCCGGAGGCGGTGGCAAGAATTCCTTGCGAATGTGTC
GTCCACAACCCGCGCCGCGCCCACTGCCTCCTGAATCGCGGAGGAAGGGCCGCAACCGGA
GGACACATGCCCTAGAACCGCGTGCTGAGCGGGGGCCACGCAGCGCAGTGCACTAGTGAT
TCTGTCGTCCCCACGCCGGGGACTGGGGAGGAGGTGACAGGCGGGAGAGGGGGCAGTTAG
ACCCTGGGAGACAGCTAGGGGCCCGACACTGCGGTTCCTGGTGGAGGGAGACACGGACCG
ACAAGCCCTGGCCAAGGGGCAGCTGTGCCCGCTTATTTATTAACAGGATAACGCTTGAAT
GTAATCCCAATAGGGGTGGCCCAGGCTGGGTACAGGGTACAGATGGTTGGGAGGAGGCAG
AGAAGCGGGGTTCCCGAGCGTTGACCTGGGTGGGGGAGGTGCCCGGAATGCCCACCCTGG
GGAAGGACCATCTCTTTGGGCGATGAGCAGAAAGCTGTGAACAGGCTGGGTGGGTGGGAT
GGGGCAGCCTGGTTGTACTAATGCAATAAACATTATCAGCTGAAGCTGGAATGTCCCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTTCGCAGCCGCTGCGTCGTTTGGCGCTGCACGTGCTGAGTGCCACGCAGGCCGAAA
GGCTGGCCCGGACAGAGGAGGCTGCTCCTGTCGCACCGCCAGGACCCAAGCTCTGGTACA
GGGACTTCCTGCAGCTGGTGGAGCCCGGAGGCGGTGGCAAGAATTCCTTGCGAATGTGTC
GTCCACAACCCGCGCCGCGCCCACTGCCTCCTGAATCGCGGAGGAAGGGCCGCAACCGGA
GGACACATGCCCTAGAACCGCGTGCTGAGCGGGGGCCACGCAGCGCAGTGCACTAGTGAT
TCTGTCGTCCCCACGCCGGGGACTGGGGAGGAGGTGACAGGCGGGAGAGGGGGCAGTTAG
ACCCTGGGAGACAGCTAGGGGCCCGACACTGCGGTTCCTGGTGGAGGGAGACACGGACCG
ACAAGCCCTGGCCAAGGGGCAGCTGTGCCCGCTTATTTATTAACAGGATAACGCTTGAAT
GTAATCCCAATAGGGGTGGCCCAGGCTGGGTACAGGGTACAGATGGTTGGGAGGAGGCAG
AGAAGCGGGGTTCCCGAGCGTTGACCTGGGTGGGGGAGGTGCCCGGAATGCCCACCCTGG
GGAAGGACCATCTCTTTGGGCGATGAGCAGAAAGCTGTGAACAGGCTGGGTGGGTGGGAT
GGGGCAGCCTGGTTGTACTAATGCAATAAACATTATCAGCTGAAGCTGGAATGTCCCCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-720, gnl|bosTau2|chr22 (38514127-38514852)
               

               
               1-720, gnl|Hg17|chr3 (50288840-50289593)
               

               
               1-720, gnl|Mm7|chr9 (107328520-107327784)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-720, gnl|bosTau2|chr22 (38514127-38514852)
               

               
               1-720, gnl|Hg17|chr3 (50288840-50289593)
               

               
               1-720, gnl|Mm7|chr9 (107328520-107327784)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	1-720, gnl\|bosTau2\|chr22 (38514127-38514852)
	1-720, gnl\|Hg17\|chr3 (50288840-50289593)
	1-720, gnl\|Mm7\|chr9 (107328520-107327784)