Ss1.1-Pig1-55K10.5
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GCACCTTTGCCGAGCAGGTCCAAGACCTGATGTTCAACTTGCACATGATCTTGACCGACA
CGGTGAAAATGAAGGAGCATCAGGAGGACCCCGAGATGCTCATTGACCTCATGTACAGGA
TCGCACGGGGCTACCAGGGCTCCCCGGACCTGCGGCTGACATGGCTGCAGAACATGGCGG
GGAAGCACGCAGAGCTGGGCAACCACGCGGAGGCCGCACAGTGCATGGTACATGCAGCTG
CCCTCGTGGCAGAGTACCTCGCTCTGCTGGAGGACAGCCGCCACCTGCCCGTGGGCTGCG
TTTCCTTCCAGAACATCTCATCCAACGTGCTGGAGGAGTCCGCCATCTCCGACGACATCC
TGTCCCCCGATGAGGAGGGCTTCTGTTCCGGGAAGCACTTCACCGAGCTGGGGCTGGTGG
GGCTGCTGGAACAGGCAGCCGCCTACTTCACCATGGGCGGGCTCTATGAGGCGGTAAATG
AGGTCTACAAGACCCTTATCCCCATCCTGGAAGCCCACCGGGACTACAAGAAGCTGGCTG
CTGTGCACGGCAAATTGCAGGAGGCCTTCACCAAGATCATGCACCAGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCACCTTTGCCGAGCAGGTCCAAGACCTGATGTTCAACTTGCACATGATCTTGACCGACA
CGGTGAAAATGAAGGAGCATCAGGAGGACCCCGAGATGCTCATTGACCTCATGTACAGGA
TCGCACGGGGCTACCAGGGCTCCCCGGACCTGCGGCTGACATGGCTGCAGAACATGGCGG
GGAAGCACGCAGAGCTGGGCAACCACGCGGAGGCCGCACAGTGCATGGTACATGCAGCTG
CCCTCGTGGCAGAGTACCTCGCTCTGCTGGAGGACAGCCGCCACCTGCCCGTGGGCTGCG
TTTCCTTCCAGAACATCTCATCCAACGTGCTGGAGGAGTCCGCCATCTCCGACGACATCC
TGTCCCCCGATGAGGAGGGCTTCTGTTCCGGGAAGCACTTCACCGAGCTGGGGCTGGTGG
GGCTGCTGGAACAGGCAGCCGCCTACTTCACCATGGGCGGGCTCTATGAGGCGGTAAATG
AGGTCTACAAGACCCTTATCCCCATCCTGGAAGCCCACCGGGACTACAAGAAGCTGGCTG
CTGTGCACGGCAAATTGCAGGAGGCCTTCACCAAGATCATGCACCAGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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206-309, - strand, RNAmicro p=0.91305 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
206-309, - strand, RNAmicro p=0.91305 |
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117-311, gnl|bosTau2|chr7 (11094051-11093857) |
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117-311, gnl|canFam2|chr20 (53063955-53063713) |
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117-311, gnl|danRer3|chrNA (177544650-177544451) |
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117-311, gnl|dasNov1|scaffold_97217 (2285-2086) |
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117-311, gnl|echTel1|scaffold_64073 (2411-2197) |
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117-311, gnl|fr1|chrUn (67660328-67660551) |
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117-311, gnl|galGal2|chr8 (27737450-27737651) |
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117-311, gnl|hg17|chr19 (11180583-11180820) |
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117-311, gnl|Hg17|chr19 (11180781-11180587) |
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117-311, gnl|loxAfr1|scaffold_668 (114833-115032) |
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117-311, gnl|mm7|chr9 (21692151-21692388) |
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117-311, gnl|Mm7|chr9 (21692349-21692155) |
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117-311, gnl|monDom2|scaffold_106 (3179053-3179276) |
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117-311, gnl|oryCun1|scaffold_174877 (33486-33689) |
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117-311, gnl|panTro1|chr20 (11577620-11577857) |
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117-311, gnl|rheMac2|chr19 (11033936-11034173) |
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117-311, gnl|rn3|chr8 (20924281-20924518) |
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117-311, gnl|tetNig1|chr3 (11733452-11733252) |
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117-311, gnl|xenTro1|scaffold_468 (1003648-1003438) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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117-311, gnl|bosTau2|chr7 (11094051-11093857) |
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117-311, gnl|canFam2|chr20 (53063955-53063713) |
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117-311, gnl|danRer3|chrNA (177544650-177544451) |
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117-311, gnl|dasNov1|scaffold_97217 (2285-2086) |
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117-311, gnl|echTel1|scaffold_64073 (2411-2197) |
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117-311, gnl|fr1|chrUn (67660328-67660551) |
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117-311, gnl|galGal2|chr8 (27737450-27737651) |
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117-311, gnl|hg17|chr19 (11180583-11180820) |
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117-311, gnl|Hg17|chr19 (11180781-11180587) |
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117-311, gnl|loxAfr1|scaffold_668 (114833-115032) |
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117-311, gnl|mm7|chr9 (21692151-21692388) |
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117-311, gnl|Mm7|chr9 (21692349-21692155) |
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117-311, gnl|monDom2|scaffold_106 (3179053-3179276) |
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117-311, gnl|oryCun1|scaffold_174877 (33486-33689) |
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117-311, gnl|panTro1|chr20 (11577620-11577857) |
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117-311, gnl|rheMac2|chr19 (11033936-11034173) |
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117-311, gnl|rn3|chr8 (20924281-20924518) |
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117-311, gnl|tetNig1|chr3 (11733452-11733252) |
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117-311, gnl|xenTro1|scaffold_468 (1003648-1003438) |
