Non-Coding RNA Search

Ss1.1-Pig1-56M08.5S

Sequence:


               
               AAAGGTGGAATATCAAGAAAATGGCCCATTATTTTCAGAGCTTAAATTTTATCAAAGAGC
TGCAAAAAAAGACAATATCAAAAAATGGATAAAACTCAAACAGCTTGATTATTTAGGAAT
TCCTCTGTTTTATGGATCTGGTATTACTGAATTCAAGGGAAGAAGTTACAGATTTATGGT
AATGGAAAGACTAGGAATAAATTTGCAGAAGATCTCAGACCAGAATGGTACTTTTAAAAA
GTCAACTGTCCTACAGCTAGGTGTCCGAATGTTGGATGTATTGGAATATATACATGAAAA
TGAATATGTCCATGGTGATATAAAAGCAGCAAATCTACTTTTGGGTTACAGAAATCCAGA
TCGGGTTTATCTTGCAGATTATGGACTTTCCTACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGTGGAATATCAAGAAAATGGCCCATTATTTTCAGAGCTTAAATTTTATCAAAGAGC
TGCAAAAAAAGACAATATCAAAAAATGGATAAAACTCAAACAGCTTGATTATTTAGGAAT
TCCTCTGTTTTATGGATCTGGTATTACTGAATTCAAGGGAAGAAGTTACAGATTTATGGT
AATGGAAAGACTAGGAATAAATTTGCAGAAGATCTCAGACCAGAATGGTACTTTTAAAAA
GTCAACTGTCCTACAGCTAGGTGTCCGAATGTTGGATGTATTGGAATATATACATGAAAA
TGAATATGTCCATGGTGATATAAAAGCAGCAAATCTACTTTTGGGTTACAGAAATCCAGA
TCGGGTTTATCTTGCAGATTATGGACTTTCCTACAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5SP88_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5SP88_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               164-271, gnl|bosTau2|chr11 (27070320-27070427)
               

               
               164-271, gnl|Hg17|chr2 (58227125-58227232)
               

               
               164-271, gnl|Mm7|chr11 (26487650-26487543)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               164-271, gnl|bosTau2|chr11 (27070320-27070427)
               

               
               164-271, gnl|Hg17|chr2 (58227125-58227232)
               

               
               164-271, gnl|Mm7|chr11 (26487650-26487543)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	164-271, gnl\|bosTau2\|chr11 (27070320-27070427)
	164-271, gnl\|Hg17\|chr2 (58227125-58227232)
	164-271, gnl\|Mm7\|chr11 (26487650-26487543)