Ss1.1-Pig1-58G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACTTTCCTGAATGATGTTTATAATTGGGAGTTTTTGATCTGGGAATCAGCTTTACTACT TTTCTTACTGCGCCTAGCCTCATTGGGGTCTGAAACCAATAAGAAATACAGCAATGTTTC AATATTACTTACTGAACAGATTAATTTATATCTTAAGATGGAAAAAAAGCCGAATAAGAA AGAACAGCTTACTCTAGTAAACAATGTATTAAAGCTCTCCACCAAATTGTTGAAAGAGTT GGACACACCGTTTAGACTCTATGGACTGACGATGAATCCCTTAATCTACAACATCACACG AGTCGTTATCCTCTCTGCTGTCTCAGGTGTTATCAGCGATCTTCTAGGATTTAATATACG ACTGTGGAAAATTAAGTCATAAGCTGAGCCATGTGCCTGGACTCTCTCCCCTTGCTGGCG TCACTGCTTAACCCATTAAGGAAAGAGATGACTGCAAAACCATGAGATACCCACCTGCTT GTTCACACACAGAGGTGCCCTCAGCTCTGCCTAATCTAACAAATGGTGTTTTCAAAGGAA CAGATCCTTTTCCAGCTGGGCGTGCAGGCTAAAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACTTTCCTGAATGATGTTTATAATTGGGAGTTTTTGATCTGGGAATCAGCTTTACTACT TTTCTTACTGCGCCTAGCCTCATTGGGGTCTGAAACCAATAAGAAATACAGCAATGTTTC AATATTACTTACTGAACAGATTAATTTATATCTTAAGATGGAAAAAAAGCCGAATAAGAA AGAACAGCTTACTCTAGTAAACAATGTATTAAAGCTCTCCACCAAATTGTTGAAAGAGTT GGACACACCGTTTAGACTCTATGGACTGACGATGAATCCCTTAATCTACAACATCACACG AGTCGTTATCCTCTCTGCTGTCTCAGGTGTTATCAGCGATCTTCTAGGATTTAATATACG ACTGTGGAAAATTAAGTCATAAGCTGAGCCATGTGCCTGGACTCTCTCCCCTTGCTGGCG TCACTGCTTAACCCATTAAGGAAAGAGATGACTGCAAAACCATGAGATACCCACCTGCTT GTTCACACACAGAGGTGCCCTCAGCTCTGCCTAATCTAACAAATGGTGTTTTCAAAGGAA CAGATCCTTTTCCAGCTGGGCGTGCAGGCTAAAAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-139, gnl|bosTau2|chr3 (24594624-24594762) | |
| 1-139, gnl|canFam2|chr17 (54608487-54608667) | |
| 1-139, gnl|danRer3|chrNA (67178417-67178251) | |
| 1-139, gnl|dasNov1|scaffold_3473 (46529-46710) | |
| 1-139, gnl|echTel1|scaffold_219087 (7132-6952) | |
| 1-139, gnl|fr1|chrUn (283108319-283108486) | |
| 1-139, gnl|galGal2|chr26 (2284163-2284331) | |
| 1-139, gnl|hg17|chr1 (113955444-113955624) | |
| 1-139, gnl|Hg17|chr1 (113955596-113955458) | |
| 1-139, gnl|loxAfr1|scaffold_79994 (2315-2133) | |
| 1-139, gnl|mm7|chr3 (103797599-103797423) | |
| 1-139, gnl|Mm7|chr3 (103797448-103797586) | |
| 1-139, gnl|monDom2|scaffold_0 (1443080-1442906) | |
| 1-139, gnl|oryCun1|scaffold_181396 (5777-5943) | |
| 1-139, gnl|panTro1|chr1 (113742940-113743120) | |
| 1-139, gnl|rheMac2|chr1 (116685033-116685213) | |
| 1-139, gnl|rn3|chr2 (199200060-199199882) | |
| 1-139, gnl|tetNig1|chr19 (3450348-3450508) | |
| 1-139, gnl|xenTro1|scaffold_11 (1357026-1356856) | |
| 362-575, gnl|bosTau2|chr3 (24597307-24597519) | |
| 362-575, gnl|Hg17|chr1 (113952389-113952178) | |
| 362-575, gnl|Mm7|chr3 (103800972-103801169) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-139, gnl|bosTau2|chr3 (24594624-24594762) | |
| 1-139, gnl|canFam2|chr17 (54608487-54608667) | |
| 1-139, gnl|danRer3|chrNA (67178417-67178251) | |
| 1-139, gnl|dasNov1|scaffold_3473 (46529-46710) | |
| 1-139, gnl|echTel1|scaffold_219087 (7132-6952) | |
| 1-139, gnl|fr1|chrUn (283108319-283108486) | |
| 1-139, gnl|galGal2|chr26 (2284163-2284331) | |
| 1-139, gnl|hg17|chr1 (113955444-113955624) | |
| 1-139, gnl|Hg17|chr1 (113955596-113955458) | |
| 1-139, gnl|loxAfr1|scaffold_79994 (2315-2133) | |
| 1-139, gnl|mm7|chr3 (103797599-103797423) | |
| 1-139, gnl|Mm7|chr3 (103797448-103797586) | |
| 1-139, gnl|monDom2|scaffold_0 (1443080-1442906) | |
| 1-139, gnl|oryCun1|scaffold_181396 (5777-5943) | |
| 1-139, gnl|panTro1|chr1 (113742940-113743120) | |
| 1-139, gnl|rheMac2|chr1 (116685033-116685213) | |
| 1-139, gnl|rn3|chr2 (199200060-199199882) | |
| 1-139, gnl|tetNig1|chr19 (3450348-3450508) | |
| 1-139, gnl|xenTro1|scaffold_11 (1357026-1356856) | |
| 362-575, gnl|bosTau2|chr3 (24597307-24597519) | |
| 362-575, gnl|Hg17|chr1 (113952389-113952178) | |
| 362-575, gnl|Mm7|chr3 (103800972-103801169) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| tes (0.207814) | |
| mga (0.160205) | |
| lnt (0.142308) | |
| ova (0.129132) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| mga (0.160205) | |
| lnt (0.142308) | |
| ova (0.129132) |