Non-Coding RNA Search

Ss1.1-Pig1-58O10.5

Sequence:


               
               TCCTGGACACGGTGGAGCTGGCCACATACACCGTGCGCACCTTCGCGCTCCACAAGAGTG
GCTCCAGTGAGAAGCGGGAGCTGCGGCAGTTCCAGTTCATGGCCTGGCCGGACCACGGGG
TTCCCGAGTACCCAACCCCCATCCTGGCCTTCCTGCGGCGGGTCAAGGCCTGCAACCCGC
TCGACGCGGGGCCCATGGTTGTGCACTGCAGCGCGGGCGTGGGCCGCACCGGCTGCTTCA
TCGTCATCGACGCCATGCTGGAGCGGATGAAGCACGAGAAGACGGTGGACATCTACGGCC
ACGTGACCTGCATGCGGGCGCAGCGCAACTACATGGTGCAGACGGAGGACCAGTACGTGT
TCATCCACGAGGCGCTGCTGGAGGCCGCCACGTGCGGACACACAGAGGTGCCCGCCCGCA
GCCTCTACGCCCACATCCAGAAGCTGGGCCAAGTGCCTCCCGGGGAGAGCGTGACTGCCA
TGGAGCTGGAGTTCAAGCTGCTGGCCAGCTCCAAGGCCCACACATCCCGCTTCATCAGCG
CCAACCTGCCCTGCAACAAGTTCAAGAACCGCCTGGTGAACATCATGCCCTACGAACTGA
CCCGGGTGTGTCTGCAGCCCATCCGCGGCGTGGAGGGCTCCGACTACATCAACGCCAGCT
TCCTGGACGGCTACAGACAGCAGAAGGCCTACATAGCCACGCAGGGGCCCCTGGCGGAGA
GCACCGAGGACTTCTGGCGCATGCTCTGGGAGCACAACTCCACCATCGTCGTCATGCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTGGACACGGTGGAGCTGGCCACATACACCGTGCGCACCTTCGCGCTCCACAAGAGTG
GCTCCAGTGAGAAGCGGGAGCTGCGGCAGTTCCAGTTCATGGCCTGGCCGGACCACGGGG
TTCCCGAGTACCCAACCCCCATCCTGGCCTTCCTGCGGCGGGTCAAGGCCTGCAACCCGC
TCGACGCGGGGCCCATGGTTGTGCACTGCAGCGCGGGCGTGGGCCGCACCGGCTGCTTCA
TCGTCATCGACGCCATGCTGGAGCGGATGAAGCACGAGAAGACGGTGGACATCTACGGCC
ACGTGACCTGCATGCGGGCGCAGCGCAACTACATGGTGCAGACGGAGGACCAGTACGTGT
TCATCCACGAGGCGCTGCTGGAGGCCGCCACGTGCGGACACACAGAGGTGCCCGCCCGCA
GCCTCTACGCCCACATCCAGAAGCTGGGCCAAGTGCCTCCCGGGGAGAGCGTGACTGCCA
TGGAGCTGGAGTTCAAGCTGCTGGCCAGCTCCAAGGCCCACACATCCCGCTTCATCAGCG
CCAACCTGCCCTGCAACAAGTTCAAGAACCGCCTGGTGAACATCATGCCCTACGAACTGA
CCCGGGTGTGTCTGCAGCCCATCCGCGGCGTGGAGGGCTCCGACTACATCAACGCCAGCT
TCCTGGACGGCTACAGACAGCAGAAGGCCTACATAGCCACGCAGGGGCCCCTGGCGGAGA
GCACCGAGGACTTCTGGCGCATGCTCTGGGAGCACAACTCCACCATCGTCGTCATGCTGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q62917_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q62917_RAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               209-500, gnl|bosTau2|chr7 (15536154-15536445)
               

               
               209-500, gnl|Hg17|chr19 (5163264-5162973)
               

               
               209-500, gnl|Mm7|chr17 (54575763-54575472)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-500, gnl|bosTau2|chr7 (15536154-15536445)
               

               
               209-500, gnl|Hg17|chr19 (5163264-5162973)
               

               
               209-500, gnl|Mm7|chr17 (54575763-54575472)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	209-500, gnl\|bosTau2\|chr7 (15536154-15536445)
	209-500, gnl\|Hg17\|chr19 (5163264-5162973)
	209-500, gnl\|Mm7\|chr17 (54575763-54575472)