Ss1.1-Pig1-59C11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGCCGAGCCTGGTCAGAGGTCCCAGCTCCCTGATGAAGAAGGCGGAGTTGTCAGCAGA CCAGGCTCCAGATGCCAACACAGAGGACTCCTCTACCAGCCTGGCTCCCACCCTACTCTA CCTAAGCACCTATGAGGCAGCACCTGCCACAGAAGAATCCCTGATCCTGCCTGTCACATC TCTTGGGCCCCAGGCTCAGCCCAGGCCTGACGGCGAGGTGATGCCCACACTGGACATGGC CTTGTTTGACTGGACCGATTATGAAGACTTAAAGCCTGCGGTCTGGCCCTCTGCGAAGAA GAGAGAGAAGCAGCGGGGTAAGCTCTCCAGTGATGGGAACGAAACATCACCAGCTGAAGG GGAGCCTTGCGGCCATCACCAGGACTGCCTGCCAGGGACCTGCTGCGACCTCCGGGAGCA CCTGTGCACGCCCCACAACCGAGGCCTGAACAACAAATGCTTTGATGACTGCATGTGCGC GGAAGGGCTCCGCTGCTATGCCAAATTCCACCGGAACCGCAGGGTAACACGGAGAAAGGG GCGCTGCGTGGAGCCGGAAACTGCCAACGGCGACCAGGGATCTTTCATCAACGTCTAGCA GCCCGCTTGCGCCAGGCGCCTCCCCACCCGCCTGGCGACTGAGCGCGGAAGTACTCGGGC ATTTGTTTAGAACTAGCGGTGGCAGATTAAATTGCGGGACCGGATGACTGAGGCTGGAGC TCAGGCCCAGGACACTCAGCCCCCAGAGGCCGCCGAGCAGCATCACACCTGCCCCCACAG GGTGCATGGGAAACCCACATCCNCTGCGCATCCCGGAATCCGGGTTCTCCGCGATGGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGCCGAGCCTGGTCAGAGGTCCCAGCTCCCTGATGAAGAAGGCGGAGTTGTCAGCAGA CCAGGCTCCAGATGCCAACACAGAGGACTCCTCTACCAGCCTGGCTCCCACCCTACTCTA CCTAAGCACCTATGAGGCAGCACCTGCCACAGAAGAATCCCTGATCCTGCCTGTCACATC TCTTGGGCCCCAGGCTCAGCCCAGGCCTGACGGCGAGGTGATGCCCACACTGGACATGGC CTTGTTTGACTGGACCGATTATGAAGACTTAAAGCCTGCGGTCTGGCCCTCTGCGAAGAA GAGAGAGAAGCAGCGGGGTAAGCTCTCCAGTGATGGGAACGAAACATCACCAGCTGAAGG GGAGCCTTGCGGCCATCACCAGGACTGCCTGCCAGGGACCTGCTGCGACCTCCGGGAGCA CCTGTGCACGCCCCACAACCGAGGCCTGAACAACAAATGCTTTGATGACTGCATGTGCGC GGAAGGGCTCCGCTGCTATGCCAAATTCCACCGGAACCGCAGGGTAACACGGAGAAAGGG GCGCTGCGTGGAGCCGGAAACTGCCAACGGCGACCAGGGATCTTTCATCAACGTCTAGCA GCCCGCTTGCGCCAGGCGCCTCCCCACCCGCCTGGCGACTGAGCGCGGAAGTACTCGGGC ATTTGTTTAGAACTAGCGGTGGCAGATTAAATTGCGGGACCGGATGACTGAGGCTGGAGC TCAGGCCCAGGACACTCAGCCCCCAGAGGCCGCCGAGCAGCATCACACCTGCCCCCACAG GGTGCATGGGAAACCCACATCCNCTGCGCATCCCGGAATCCGGGTTCTCCGCGATGGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 1-194, gnl|bosTau2|chr16 (21612329-21612138) | |
| 1-194, gnl|canFam2|chr2 (87407156-87406911) | |
| 1-194, gnl|canFam2|chr2 (87406918-87407108) | |
| 1-194, gnl|dasNov1|scaffold_74524 (3134-2858) | |
| 1-194, gnl|dasNov1|scaffold_74524 (2884-3074) | |
| 1-194, gnl|echTel1|scaffold_253497 (7301-7045) | |
| 1-194, gnl|echTel1|scaffold_253497 (7068-7257) | |
| 1-194, gnl|galGal2|chr21 (5379936-5379676) | |
| 1-194, gnl|hg17|chr1 (11703538-11703809) | |
| 1-194, gnl|Hg17|chr1 (11703595-11703789) | |
| 1-194, gnl|hg17|chrX (8561599-8561786) | |
| 1-194, gnl|loxAfr1|scaffold_103814 (3610-3863) | |
| 1-194, gnl|loxAfr1|scaffold_103814 (3840-3654) | |
| 1-194, gnl|mm7|chr4 (147102501-147102237) | |
| 1-194, gnl|mm7|chr4 (147102254-147102447) | |
| 1-194, gnl|Mm7|chr4 (147102450-147102253) | |
| 1-194, gnl|monDom2|scaffold_175 (414523-414269) | |
| 1-194, gnl|monDom2|scaffold_175 (414278-414449) | |
| 1-194, gnl|oryCun1|scaffold_172090 (9914-9634) | |
| 1-194, gnl|oryCun1|scaffold_172090 (9651-9841) | |
| 1-194, gnl|panTro1|chr1 (11919490-11919762) | |
| 1-194, gnl|panTro1|chrX (8827270-8827457) | |
| 1-194, gnl|rheMac2|chr1 (14806253-14806524) | |
| 1-194, gnl|rheMac2|chrX (6382681-6382868) | |
| 1-194, gnl|rn3|chr5 (165201051-165200787) | |
| 1-194, gnl|rn3|chr5 (165200804-165200997) | |
| 484-746, gnl|bosTau2|chr16 (21603483-21603216) | |
| 484-746, gnl|Hg17|chr1 (11713905-11714156) | |
| 484-746, gnl|Mm7|chr4 (147092126-147091863) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-194, gnl|bosTau2|chr16 (21612329-21612138) | |
| 1-194, gnl|canFam2|chr2 (87407156-87406911) | |
| 1-194, gnl|canFam2|chr2 (87406918-87407108) | |
| 1-194, gnl|dasNov1|scaffold_74524 (3134-2858) | |
| 1-194, gnl|dasNov1|scaffold_74524 (2884-3074) | |
| 1-194, gnl|echTel1|scaffold_253497 (7301-7045) | |
| 1-194, gnl|echTel1|scaffold_253497 (7068-7257) | |
| 1-194, gnl|galGal2|chr21 (5379936-5379676) | |
| 1-194, gnl|hg17|chr1 (11703538-11703809) | |
| 1-194, gnl|Hg17|chr1 (11703595-11703789) | |
| 1-194, gnl|hg17|chrX (8561599-8561786) | |
| 1-194, gnl|loxAfr1|scaffold_103814 (3610-3863) | |
| 1-194, gnl|loxAfr1|scaffold_103814 (3840-3654) | |
| 1-194, gnl|mm7|chr4 (147102501-147102237) | |
| 1-194, gnl|mm7|chr4 (147102254-147102447) | |
| 1-194, gnl|Mm7|chr4 (147102450-147102253) | |
| 1-194, gnl|monDom2|scaffold_175 (414523-414269) | |
| 1-194, gnl|monDom2|scaffold_175 (414278-414449) | |
| 1-194, gnl|oryCun1|scaffold_172090 (9914-9634) | |
| 1-194, gnl|oryCun1|scaffold_172090 (9651-9841) | |
| 1-194, gnl|panTro1|chr1 (11919490-11919762) | |
| 1-194, gnl|panTro1|chrX (8827270-8827457) | |
| 1-194, gnl|rheMac2|chr1 (14806253-14806524) | |
| 1-194, gnl|rheMac2|chrX (6382681-6382868) | |
| 1-194, gnl|rn3|chr5 (165201051-165200787) | |
| 1-194, gnl|rn3|chr5 (165200804-165200997) | |
| 484-746, gnl|bosTau2|chr16 (21603483-21603216) | |
| 484-746, gnl|Hg17|chr1 (11713905-11714156) | |
| 484-746, gnl|Mm7|chr4 (147092126-147091863) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |