Non-Coding RNA Search

Ss1.1-Pig1-5B03.5

Sequence:


               
               GGCGGGGGCTCAGCCGTCGGTACCCCGNCGTCCTGGGGGTCCCCGCCCGCCTGCTCCGGA
ACGCTCACGGAGCCAGAGCGCCTGGGGAGCAGGGTCCCCGACTGGGCCCCTGGGTGACAC
CCCCTTACTGCCCTGGGCTGCAGTCCTCCTCGCAGCTGTCCCAAGGAGAGCCCCCAACGC
AGCCCTTTGGATGCCGTCTCAAGCTTGTTCCGGAACGCAGACACCCCCGGCGCCCGGGAA
CCAGCCCATACCCTGGACATCACCCCCCGCGTCTCTGGAGCTGGCTGCAGCGTACCAGGG
TATCTCTGTGTCTCCGGAGTCCTATCTGTCACCAGAAACCCCTCCTCTCCTGCCCGGCCC
GCCATGCCAGAGATTCCAGCCTCAGGCCCAGTGGGAGTGCTGGAGCCACAGTGCAGAAGG
GCTGCCCAGCTTGGAGGACCAGGCCCCAGACCCTGCCTTCCAGCTCAGTGATCAAAGCCG
TCCCCAGAGCTCAGGCCTACAGCTCAGTGGCTGCCCTGAACTTTGGCAGGAAGATCTGGG
GGGGGCTCACCTGGGCATCTTCTACTGATGGCCTTGCCTGACCCCCCTTTCAGCCAGGAC
TCAGGCCTGTTGTGTGGGGAGCCCTCCTCATTTGTGGTTTGTGTGTCTTAATCTTCTTCC
TGAACTTTGGCAGGAAGATCTGGGGGGGGCTCACCTGGGCATCTTCTACTGATGGCCTTG
CCTGACCCCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGGGGCTCAGCCGTCGGTACCCCGNCGTCCTGGGGGTCCCCGCCCGCCTGCTCCGGA
ACGCTCACGGAGCCAGAGCGCCTGGGGAGCAGGGTCCCCGACTGGGCCCCTGGGTGACAC
CCCCTTACTGCCCTGGGCTGCAGTCCTCCTCGCAGCTGTCCCAAGGAGAGCCCCCAACGC
AGCCCTTTGGATGCCGTCTCAAGCTTGTTCCGGAACGCAGACACCCCCGGCGCCCGGGAA
CCAGCCCATACCCTGGACATCACCCCCCGCGTCTCTGGAGCTGGCTGCAGCGTACCAGGG
TATCTCTGTGTCTCCGGAGTCCTATCTGTCACCAGAAACCCCTCCTCTCCTGCCCGGCCC
GCCATGCCAGAGATTCCAGCCTCAGGCCCAGTGGGAGTGCTGGAGCCACAGTGCAGAAGG
GCTGCCCAGCTTGGAGGACCAGGCCCCAGACCCTGCCTTCCAGCTCAGTGATCAAAGCCG
TCCCCAGAGCTCAGGCCTACAGCTCAGTGGCTGCCCTGAACTTTGGCAGGAAGATCTGGG
GGGGGCTCACCTGGGCATCTTCTACTGATGGCCTTGCCTGACCCCCCTTTCAGCCAGGAC
TCAGGCCTGTTGTGTGGGGAGCCCTCCTCATTTGTGGTTTGTGTGTCTTAATCTTCTTCC
TGAACTTTGGCAGGAAGATCTGGGGGGGGCTCACCTGGGCATCTTCTACTGATGGCCTTG
CCTGACCCCCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-299, gnl|bosTau2|chr21 (15454280-15453986)
               

               
               7-299, gnl|Hg17|chr15 (88121212-88121517)
               

               
               7-299, gnl|Mm7|chr7 (75680195-75680489)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-299, gnl|bosTau2|chr21 (15454280-15453986)
               

               
               7-299, gnl|Hg17|chr15 (88121212-88121517)
               

               
               7-299, gnl|Mm7|chr7 (75680195-75680489)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	7-299, gnl\|bosTau2\|chr21 (15454280-15453986)
	7-299, gnl\|Hg17\|chr15 (88121212-88121517)
	7-299, gnl\|Mm7\|chr7 (75680195-75680489)