Non-Coding RNA Search

Ss1.1-Pig1-61F10.5

Sequence:


               
               ACATATAGCTGCAATAAGCATAAAATGAGTCCTACTTCAATTAAGACTGTTTATCATACA
TTTTACTTTCCTATCCAAACTGGTAGGAAAATCAAGCTGTATCACTTGTCAGCTACGTAC
TGTTACAGGAATATTCATCCTGCTACAGAAAAAGGATGCTACAGCAAGAGTTTATGTAAC
TATCTAATAATGACATTATAACTTCTTGAATTTAGTTTTCGAAGACAGTGAATTTAACAA
GGCTTTCCTCGGGAAGCAGCTTACTGTTAAGTGTGTCCGGTTATGTGGTTTCATTCAGTT
GCTCCTCAAAGCCGATAACCCAAATATGCTGAGGCAATGACATGATTTCCACTGTCAATT
GCTATAATCAGAGCACAACTACTGTAGAGAGAAAAAAAAAAATCTTGATTCCTGAGGTAT
CTTCTCCTATTGGGATGGAGAGCCTGTGGAAACCTCTGACTGTTCTTCTCTGGTTAGGGA
GATGCCAAATGAATCACAGTATAGGTGGGTAAGGTGGTCCTGGAATGTGGTGCTGTTTGA
GAGATACTTGCTAAAAGGAGTTTCCTTGAGTTGTACAGCAGTCAGATCAAACCAGGGGAA
AGGCCTGAAGTAGGAAAAAAAAAAGATGTAGGCTTTTATATGTTTGTTCAATACATCTGA
TTTTTCTGTTAAACATTTCCTTTAAAGAAAATATTCCTCCCCTTGGAAGTAAGATTCTTC
ATTTTCTGTATCAAACTAATTAAAATTCATAGTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATATAGCTGCAATAAGCATAAAATGAGTCCTACTTCAATTAAGACTGTTTATCATACA
TTTTACTTTCCTATCCAAACTGGTAGGAAAATCAAGCTGTATCACTTGTCAGCTACGTAC
TGTTACAGGAATATTCATCCTGCTACAGAAAAAGGATGCTACAGCAAGAGTTTATGTAAC
TATCTAATAATGACATTATAACTTCTTGAATTTAGTTTTCGAAGACAGTGAATTTAACAA
GGCTTTCCTCGGGAAGCAGCTTACTGTTAAGTGTGTCCGGTTATGTGGTTTCATTCAGTT
GCTCCTCAAAGCCGATAACCCAAATATGCTGAGGCAATGACATGATTTCCACTGTCAATT
GCTATAATCAGAGCACAACTACTGTAGAGAGAAAAAAAAAAATCTTGATTCCTGAGGTAT
CTTCTCCTATTGGGATGGAGAGCCTGTGGAAACCTCTGACTGTTCTTCTCTGGTTAGGGA
GATGCCAAATGAATCACAGTATAGGTGGGTAAGGTGGTCCTGGAATGTGGTGCTGTTTGA
GAGATACTTGCTAAAAGGAGTTTCCTTGAGTTGTACAGCAGTCAGATCAAACCAGGGGAA
AGGCCTGAAGTAGGAAAAAAAAAAGATGTAGGCTTTTATATGTTTGTTCAATACATCTGA
TTTTTCTGTTAAACATTTCCTTTAAAGAAAATATTCCTCCCCTTGGAAGTAAGATTCTTC
ATTTTCTGTATCAAACTAATTAAAATTCATAGTTAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               332-756, gnl|bosTau2|chr10 (61132674-61133098)
               

               
               332-756, gnl|Hg17|chr14 (76930628-76931038)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               332-756, gnl|bosTau2|chr10 (61132674-61133098)
               

               
               332-756, gnl|Hg17|chr14 (76930628-76931038)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               tra (0.492368)
               

               
               cte (0.29274)
               

               
               tes (0.207814)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.492368)
               

               
               cte (0.29274)
               

               
               tes (0.207814)
               

               
               clu (0.119646)

	332-756, gnl\|bosTau2\|chr10 (61132674-61133098)
	332-756, gnl\|Hg17\|chr14 (76930628-76931038)