Ss1.1-Pig1-62B09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGTTCCAGGCCCTGTGAGCCAGAAGACCTCATTGATGGGATCATCTTTGCTGCCAACT ACCTGGGGTCGACACAGCTGCTTTCGGAGCGGAACCCTTCCAAAAACATCAGGATGATGC AGGCGCAGGAGGCCAGCCGGGTCAAGAATTCTGAGGGGGATGCCCAGACTCTGACCGAAG TGGACCTCTTCATCTCCACCCAGAGGATCAAGGTGTTAAATGCGGACACACAGGAGACCA TGATGGACCACGCCCTGCGCACCATCTCCTACATCGCAGACATCGGAAACATCGTGGTGC TGATGGCCAGGCGCCGCATGCCGAGGTCGGCCTCTCAGGACTGTATCGAGACCACCCCTG GGGCCCAGGAGGGGAGGAAGCAGTACAAGATGATCTGCCACGTGTTCGAGTCCGAGGACG CTCAGCTGATCGCCCAGTCCATCGGCCAGGCCTTCAGCGTGGCCTACCAGGAATTCCTGC GGGCCAACGGCATCAACCCTGAGGACCTGAGCCAGAAGGAGTACAGTGACATCATCAACA CCCAGGAAATGTACAACGACGACCTCATCCACTTCTCCAACTCAGAGAACTGCAAGGAGC TGCAGCTGGAGAAGCACAAGGGAGAGATCCTGGGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGTTCCAGGCCCTGTGAGCCAGAAGACCTCATTGATGGGATCATCTTTGCTGCCAACT ACCTGGGGTCGACACAGCTGCTTTCGGAGCGGAACCCTTCCAAAAACATCAGGATGATGC AGGCGCAGGAGGCCAGCCGGGTCAAGAATTCTGAGGGGGATGCCCAGACTCTGACCGAAG TGGACCTCTTCATCTCCACCCAGAGGATCAAGGTGTTAAATGCGGACACACAGGAGACCA TGATGGACCACGCCCTGCGCACCATCTCCTACATCGCAGACATCGGAAACATCGTGGTGC TGATGGCCAGGCGCCGCATGCCGAGGTCGGCCTCTCAGGACTGTATCGAGACCACCCCTG GGGCCCAGGAGGGGAGGAAGCAGTACAAGATGATCTGCCACGTGTTCGAGTCCGAGGACG CTCAGCTGATCGCCCAGTCCATCGGCCAGGCCTTCAGCGTGGCCTACCAGGAATTCCTGC GGGCCAACGGCATCAACCCTGAGGACCTGAGCCAGAAGGAGTACAGTGACATCATCAACA CCCAGGAAATGTACAACGACGACCTCATCCACTTCTCCAACTCAGAGAACTGCAAGGAGC TGCAGCTGGAGAAGCACAAGGGAGAGATCCTGGGCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 4-146, gnl|bosTau2|chr21 (858564-858418) | |
| 4-146, gnl|canFam2|chr3 (41261770-41261942) | |
| 4-146, gnl|danRer3|chrUn (80185555-80185728) | |
| 4-146, gnl|dasNov1|scaffold_375 (63614-63783) | |
| 4-146, gnl|echTel1|scaffold_315289 (89647-89479) | |
| 4-146, gnl|fr1|chrUn (129443668-129443499) | |
| 4-146, gnl|galGal2|chr10 (6649816-6649988) | |
| 4-146, gnl|hg17|chr15 (27172546-27172720) | |
| 4-146, gnl|Hg17|chr15 (27172569-27172715) | |
| 4-146, gnl|loxAfr1|scaffold_135265 (619-790) | |
| 4-146, gnl|mm7|chr7 (60591458-60591630) | |
| 4-146, gnl|Mm7|chr7 (60591479-60591625) | |
| 4-146, gnl|monDom2|scaffold_12 (57233701-57233874) | |
| 4-146, gnl|oryCun1|scaffold_214218 (46082-46253) | |
| 4-146, gnl|panTro1|chr16_random (670815-670989) | |
| 4-146, gnl|rheMac2|chr7 (8184338-8184510) | |
| 4-146, gnl|rn3|chr1 (119216211-119216383) | |
| 4-146, gnl|tetNig1|chr13 (12140371-12140521) | |
| 4-146, gnl|xenTro1|scaffold_577 (430371-430527) | |
| 231-420, gnl|bosTau2|chr21 (850360-850171) | |
| 231-420, gnl|canFam2|chr3 (41268541-41268762) | |
| 231-420, gnl|danRer3|chrUn (80205721-80205922) | |
| 231-420, gnl|dasNov1|scaffold_375 (73148-73365) | |
| 231-420, gnl|echTel1|scaffold_180365 (5176-5388) | |
| 231-420, gnl|fr1|chrUn (129438498-129438279) | |
| 231-420, gnl|galGal2|chr10 (6657123-6657344) | |
| 231-420, gnl|hg17|chr15 (27181067-27181294) | |
| 231-420, gnl|Hg17|chr15 (27181091-27181280) | |
| 231-420, gnl|loxAfr1|scaffold_32188 (7944-8152) | |
| 231-420, gnl|mm7|chr7 (60597645-60597866) | |
| 231-420, gnl|Mm7|chr7 (60597663-60597852) | |
| 231-420, gnl|monDom2|scaffold_12 (57250008-57250223) | |
| 231-420, gnl|oryCun1|scaffold_90529 (3018-3246) | |
| 231-420, gnl|panTro1|chr16_random (679388-679609) | |
| 231-420, gnl|rheMac2|chr7 (8192974-8193195) | |
| 231-420, gnl|rn3|chr1 (119221218-119221439) | |
| 231-420, gnl|tetNig1|chr5 (7134069-7134266) | |
| 231-420, gnl|xenTro1|scaffold_577 (443073-443284) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-146, gnl|bosTau2|chr21 (858564-858418) | |
| 4-146, gnl|canFam2|chr3 (41261770-41261942) | |
| 4-146, gnl|danRer3|chrUn (80185555-80185728) | |
| 4-146, gnl|dasNov1|scaffold_375 (63614-63783) | |
| 4-146, gnl|echTel1|scaffold_315289 (89647-89479) | |
| 4-146, gnl|fr1|chrUn (129443668-129443499) | |
| 4-146, gnl|galGal2|chr10 (6649816-6649988) | |
| 4-146, gnl|hg17|chr15 (27172546-27172720) | |
| 4-146, gnl|Hg17|chr15 (27172569-27172715) | |
| 4-146, gnl|loxAfr1|scaffold_135265 (619-790) | |
| 4-146, gnl|mm7|chr7 (60591458-60591630) | |
| 4-146, gnl|Mm7|chr7 (60591479-60591625) | |
| 4-146, gnl|monDom2|scaffold_12 (57233701-57233874) | |
| 4-146, gnl|oryCun1|scaffold_214218 (46082-46253) | |
| 4-146, gnl|panTro1|chr16_random (670815-670989) | |
| 4-146, gnl|rheMac2|chr7 (8184338-8184510) | |
| 4-146, gnl|rn3|chr1 (119216211-119216383) | |
| 4-146, gnl|tetNig1|chr13 (12140371-12140521) | |
| 4-146, gnl|xenTro1|scaffold_577 (430371-430527) | |
| 231-420, gnl|bosTau2|chr21 (850360-850171) | |
| 231-420, gnl|canFam2|chr3 (41268541-41268762) | |
| 231-420, gnl|danRer3|chrUn (80205721-80205922) | |
| 231-420, gnl|dasNov1|scaffold_375 (73148-73365) | |
| 231-420, gnl|echTel1|scaffold_180365 (5176-5388) | |
| 231-420, gnl|fr1|chrUn (129438498-129438279) | |
| 231-420, gnl|galGal2|chr10 (6657123-6657344) | |
| 231-420, gnl|hg17|chr15 (27181067-27181294) | |
| 231-420, gnl|Hg17|chr15 (27181091-27181280) | |
| 231-420, gnl|loxAfr1|scaffold_32188 (7944-8152) | |
| 231-420, gnl|mm7|chr7 (60597645-60597866) | |
| 231-420, gnl|Mm7|chr7 (60597663-60597852) | |
| 231-420, gnl|monDom2|scaffold_12 (57250008-57250223) | |
| 231-420, gnl|oryCun1|scaffold_90529 (3018-3246) | |
| 231-420, gnl|panTro1|chr16_random (679388-679609) | |
| 231-420, gnl|rheMac2|chr7 (8192974-8193195) | |
| 231-420, gnl|rn3|chr1 (119221218-119221439) | |
| 231-420, gnl|tetNig1|chr5 (7134069-7134266) | |
| 231-420, gnl|xenTro1|scaffold_577 (443073-443284) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |