Non-Coding RNA Search

Ss1.1-Pig1-64C15.5

Sequence:


               
               GTAGAATCAAAGAGCTTCTTTTGGACATACTGACTTTCCTTTCTTTCTTCTTTTCTTCTC
TCTCTTCTCTTCCTTGTGGATATTATGGCTAATAACACAACAAGTTTAGGGAGTCCATGG
CCAGAAAACTTTTGGGAGGATCTTATAATGTCCTTCACAGTGTCCATGGCAATTGCACTT
GTGATTGGAGGATTTATTTGGGCTTTGTTTGTTTGTCTGTCTCGAAGAAGAGCCAGTGCC
CCCATCTCACAGTGGAGTTCAAGCCGGCGATCTAGATCTTCCTACTCCCATGGCCTCAAC
AGAACTGGATTTTACCGCCACAGCGGCTGTGAACGTCGAAGCAACCTCAGCCTGGCCAGC
CTCACTTTCCAGCGCCAAGCATCCATGGAACAAGCAAATTCCTTTCCCAGAAAATCAAGC
TTCAGGGGGTCAACGTTCCATCCCTTCCTGCAAAGTCCACCCCTTCCCGTGGAAACTGAG
AGTCAGCTGGTGACTCTTCCTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGAATCAAAGAGCTTCTTTTGGACATACTGACTTTCCTTTCTTTCTTCTTTTCTTCTC
TCTCTTCTCTTCCTTGTGGATATTATGGCTAATAACACAACAAGTTTAGGGAGTCCATGG
CCAGAAAACTTTTGGGAGGATCTTATAATGTCCTTCACAGTGTCCATGGCAATTGCACTT
GTGATTGGAGGATTTATTTGGGCTTTGTTTGTTTGTCTGTCTCGAAGAAGAGCCAGTGCC
CCCATCTCACAGTGGAGTTCAAGCCGGCGATCTAGATCTTCCTACTCCCATGGCCTCAAC
AGAACTGGATTTTACCGCCACAGCGGCTGTGAACGTCGAAGCAACCTCAGCCTGGCCAGC
CTCACTTTCCAGCGCCAAGCATCCATGGAACAAGCAAATTCCTTTCCCAGAAAATCAAGC
TTCAGGGGGTCAACGTTCCATCCCTTCCTGCAAAGTCCACCCCTTCCCGTGGAAACTGAG
AGTCAGCTGGTGACTCTTCCTTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61880673|ref|XP_614349.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61880673|ref|XP_614349.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               136-504, gnl|bosTau2|chr3 (648199-647848)
               

               
               136-504, gnl|Hg17|chr6 (153134990-153135361)
               

               
               136-504, gnl|Mm7|chr10 (4742605-4742234)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               136-504, gnl|bosTau2|chr3 (648199-647848)
               

               
               136-504, gnl|Hg17|chr6 (153134990-153135361)
               

               
               136-504, gnl|Mm7|chr10 (4742605-4742234)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               mas (0.210305)
               

               
               cst (0.140036)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               cst (0.140036)
               

               
               cty (0.10408)

	136-504, gnl\|bosTau2\|chr3 (648199-647848)
	136-504, gnl\|Hg17\|chr6 (153134990-153135361)
	136-504, gnl\|Mm7\|chr10 (4742605-4742234)