Non-Coding RNA Search

Ss1.1-Pig1-65C24.5

Sequence:


               
               GGACTGACCTCTGTTCAGATCTTCGTTCGTCCACATCCCCGCTGTGTGATCCTAGGCAAG
TCACGTAACCCTTTTGAACCTCAGTTTCTGTATTTCTGCTCAAAACCTGCCTCCTCAAAA
CCTCCTCTACCTCCTGTCTTTCATTCATACTTTCCCTTTGGGGACCACAAACAAGTCTGC
CCTTGTTTAGAAAACTGATAGAAATATCAGTTTTAATTGCTGCTTAACAAATTACCCTGA
ACACATAGTGCCTTATGACAAGAAATGGTTATTAGCTCGCTTTTTCTGTGGGCCAGGAAT
TTGGGAGCACATGCAGAGCTGGTGGTTTATGGGAGGGGGGCCTGGCTCTGAGGAACTCTG
CAGCCCGGCCACTCCCCTGTCTTCTCTAGCTAAGCAGCTGATCCGCCTCCTGCTGAAGAC
AGACCCCACGGAGAGGCTGACCATCTCACAATTCATGAACCATCCCTGGATCAACCAATC
AATGGTGGTGCCGCAGACTCCACTGGGTGATGAGCTTGAGCAGGGCTGCCAGGAGGGGTG
ACAGCTCTGGAGGCCCTGGTGTGGGCCACAGATGTGTGGTAGTGCCCCACCTACAGCCTG
CCTTTGCCACTGCTCCCATCAGGCTCCTTCATCTCCCTGAGCCTCAGTTTCCCCATCTGA
GATTGGAAGGAAGGGGGTGGGATGGGACAGCCCATGCTGTCCCTGGTGCCTGCAGGGTCT
CATCTATGGACTTGGGGCTCCTTCCAGCAATCAATGGTGGTGCCGCAGACTCCACTCTAC
ACAGCCCGAGTGCTGCAGGAGGACAAAGACCACTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACTGACCTCTGTTCAGATCTTCGTTCGTCCACATCCCCGCTGTGTGATCCTAGGCAAG
TCACGTAACCCTTTTGAACCTCAGTTTCTGTATTTCTGCTCAAAACCTGCCTCCTCAAAA
CCTCCTCTACCTCCTGTCTTTCATTCATACTTTCCCTTTGGGGACCACAAACAAGTCTGC
CCTTGTTTAGAAAACTGATAGAAATATCAGTTTTAATTGCTGCTTAACAAATTACCCTGA
ACACATAGTGCCTTATGACAAGAAATGGTTATTAGCTCGCTTTTTCTGTGGGCCAGGAAT
TTGGGAGCACATGCAGAGCTGGTGGTTTATGGGAGGGGGGCCTGGCTCTGAGGAACTCTG
CAGCCCGGCCACTCCCCTGTCTTCTCTAGCTAAGCAGCTGATCCGCCTCCTGCTGAAGAC
AGACCCCACGGAGAGGCTGACCATCTCACAATTCATGAACCATCCCTGGATCAACCAATC
AATGGTGGTGCCGCAGACTCCACTGGGTGATGAGCTTGAGCAGGGCTGCCAGGAGGGGTG
ACAGCTCTGGAGGCCCTGGTGTGGGCCACAGATGTGTGGTAGTGCCCCACCTACAGCCTG
CCTTTGCCACTGCTCCCATCAGGCTCCTTCATCTCCCTGAGCCTCAGTTTCCCCATCTGA
GATTGGAAGGAAGGGGGTGGGATGGGACAGCCCATGCTGTCCCTGGTGCCTGCAGGGTCT
CATCTATGGACTTGGGGCTCCTTCCAGCAATCAATGGTGGTGCCGCAGACTCCACTCTAC
ACAGCCCGAGTGCTGCAGGAGGACAAAGACCACTGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-816, gnl|bosTau2|chr22 (38908459-38909257)
               

               
               3-816, gnl|Hg17|chr3 (50658779-50659626)
               

               
               3-816, gnl|Mm7|chr9 (106987547-106986522)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-816, gnl|bosTau2|chr22 (38908459-38909257)
               

               
               3-816, gnl|Hg17|chr3 (50658779-50659626)
               

               
               3-816, gnl|Mm7|chr9 (106987547-106986522)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.119646)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	3-816, gnl\|bosTau2\|chr22 (38908459-38909257)
	3-816, gnl\|Hg17\|chr3 (50658779-50659626)
	3-816, gnl\|Mm7\|chr9 (106987547-106986522)