Ss1.1-Pig1-65N19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTCCGCTCACACCCTGGCCTGTCCTCTCCTGTTCTCCAGCATGGCGTGTCTGTGTTTC TCCAGAGGCTCCTGGATGGCAGCTCTGACAGTGATAGTGGTGGTGCTGAGCCCTCCTCTG GCTTTGGCCAGGGACATCGCACAGCATTTCTTCTTTATGGGGAAATCCGAGTGTCATTTC TTCAACGGGACAGAGCGGGTGAGGTATCTGCAGAAGTACTTGTATAACGGAGAGGAGTTC GTGCGCTTCGACAGCGACTTGGGCGAGTTCCGGGCGGTGACCGAGCTGGGGCGGCCAGAC GCCAAGTACTGGAACAGCCAGAAGGACCTCATGGAGCAGAAGCGGGCGGTGGTGGACACG TACTGCAGACACAACTACAGGATCTTGGATACATTCCTCGTGCCGCGGCGAGCTGAGCCC ACAGTGACAGTGTATCCTGCAAAGACCCAGCCCCTGCAGCACCACAACCTCCTGGTCTGC TCTGTGACCGGGTTCTACCCAGGCCACGTGGAGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTCCGCTCACACCCTGGCCTGTCCTCTCCTGTTCTCCAGCATGGCGTGTCTGTGTTTC TCCAGAGGCTCCTGGATGGCAGCTCTGACAGTGATAGTGGTGGTGCTGAGCCCTCCTCTG GCTTTGGCCAGGGACATCGCACAGCATTTCTTCTTTATGGGGAAATCCGAGTGTCATTTC TTCAACGGGACAGAGCGGGTGAGGTATCTGCAGAAGTACTTGTATAACGGAGAGGAGTTC GTGCGCTTCGACAGCGACTTGGGCGAGTTCCGGGCGGTGACCGAGCTGGGGCGGCCAGAC GCCAAGTACTGGAACAGCCAGAAGGACCTCATGGAGCAGAAGCGGGCGGTGGTGGACACG TACTGCAGACACAACTACAGGATCTTGGATACATTCCTCGTGCCGCGGCGAGCTGAGCCC ACAGTGACAGTGTATCCTGCAAAGACCCAGCCCCTGCAGCACCACAACCTCCTGGTCTGC TCTGTGACCGGGTTCTACCCAGGCCACGTGGAGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 21-138, gnl|bosTau2|chr23 (21236088-21236205) | |
| 21-138, gnl|canFam2|chr12 (5254003-5254141) | |
| 21-138, gnl|dasNov1|scaffold_23750 (14255-14386) | |
| 21-138, gnl|echTel1|scaffold_103957 (609-463) | |
| 21-138, gnl|hg17|chr6 (32665390-32665536) | |
| 21-138, gnl|Hg17|chr6 (32665519-32665402) | |
| 21-138, gnl|loxAfr1|scaffold_36898 (7532-7395) | |
| 21-138, gnl|mm7|chr17 (32383382-32383244) | |
| 21-138, gnl|Mm7|chr17 (32383262-32383368) | |
| 21-138, gnl|monDom2|scaffold_42 (16267144-16266995) | |
| 21-138, gnl|oryCun1|scaffold_173411 (15197-15065) | |
| 21-138, gnl|panTro1|chr5 (33118451-33118597) | |
| 21-138, gnl|rheMac2|chr4 (32322304-32322450) | |
| 21-138, gnl|rn3|chr20 (4681120-4681258) | |
| 22-136, gnl|bosTau2|chr23 (21278740-21278852) | |
| 22-136, gnl|Hg17|chr6_hla_hap1 (73281-73167) | |
| 22-136, gnl|Mm7|chr17 (32475542-32475438) | |
| 159-421, gnl|bosTau2|chr23 (21283969-21284234) | |
| 159-421, gnl|Hg17|chr6 (32633925-32633662) | |
| 159-421, gnl|Mm7|chr17 (32386932-32387190) | |
| 169-418, gnl|bosTau2|chr23 (21242372-21242621) | |
| 169-418, gnl|canFam2|chr12 (5252266-5252445) | |
| 169-418, gnl|dasNov1|scaffold_30303 (8541-8362) | |
| 169-418, gnl|echTel1|scaffold_60138 (287-466) | |
| 169-418, gnl|hg17|chr6 (32535570-32535750) | |
| 169-418, gnl|Hg17|chr6 (32660107-32659858) | |
| 169-418, gnl|mm7|chr17 (32387191-32387013) | |
| 169-418, gnl|Mm7|chr17 (32386942-32387190) | |
| 169-418, gnl|monDom2|scaffold_42 (463727-463906) | |
| 169-418, gnl|oryCun1|scaffold_173411 (37396-37221) | |
| 169-418, gnl|panTro1|chr5 (32928217-32928397) | |
| 169-418, gnl|rheMac2|chr4 (32082078-32082250) | |
| 169-418, gnl|rn3|chr20 (4677077-4677255) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-138, gnl|bosTau2|chr23 (21236088-21236205) | |
| 21-138, gnl|canFam2|chr12 (5254003-5254141) | |
| 21-138, gnl|dasNov1|scaffold_23750 (14255-14386) | |
| 21-138, gnl|echTel1|scaffold_103957 (609-463) | |
| 21-138, gnl|hg17|chr6 (32665390-32665536) | |
| 21-138, gnl|Hg17|chr6 (32665519-32665402) | |
| 21-138, gnl|loxAfr1|scaffold_36898 (7532-7395) | |
| 21-138, gnl|mm7|chr17 (32383382-32383244) | |
| 21-138, gnl|Mm7|chr17 (32383262-32383368) | |
| 21-138, gnl|monDom2|scaffold_42 (16267144-16266995) | |
| 21-138, gnl|oryCun1|scaffold_173411 (15197-15065) | |
| 21-138, gnl|panTro1|chr5 (33118451-33118597) | |
| 21-138, gnl|rheMac2|chr4 (32322304-32322450) | |
| 21-138, gnl|rn3|chr20 (4681120-4681258) | |
| 22-136, gnl|bosTau2|chr23 (21278740-21278852) | |
| 22-136, gnl|Hg17|chr6_hla_hap1 (73281-73167) | |
| 22-136, gnl|Mm7|chr17 (32475542-32475438) | |
| 159-421, gnl|bosTau2|chr23 (21283969-21284234) | |
| 159-421, gnl|Hg17|chr6 (32633925-32633662) | |
| 159-421, gnl|Mm7|chr17 (32386932-32387190) | |
| 169-418, gnl|bosTau2|chr23 (21242372-21242621) | |
| 169-418, gnl|canFam2|chr12 (5252266-5252445) | |
| 169-418, gnl|dasNov1|scaffold_30303 (8541-8362) | |
| 169-418, gnl|echTel1|scaffold_60138 (287-466) | |
| 169-418, gnl|hg17|chr6 (32535570-32535750) | |
| 169-418, gnl|Hg17|chr6 (32660107-32659858) | |
| 169-418, gnl|mm7|chr17 (32387191-32387013) | |
| 169-418, gnl|Mm7|chr17 (32386942-32387190) | |
| 169-418, gnl|monDom2|scaffold_42 (463727-463906) | |
| 169-418, gnl|oryCun1|scaffold_173411 (37396-37221) | |
| 169-418, gnl|panTro1|chr5 (32928217-32928397) | |
| 169-418, gnl|rheMac2|chr4 (32082078-32082250) | |
| 169-418, gnl|rn3|chr20 (4677077-4677255) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.383362) | |
| cty (0.20816) | |
| cov (0.132153) |