Ss1.1-Pig1-66F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCCATTCTTCCAAGGTCTGTCGGACCATGGCGAAGCTGATGGTGCTCACCCTCTTGGGG CTGGGGCTAGCACTCTTCAGGGATCATCGGTCTTCTTATCTTACAAGAATGAATGCTTTC CGAGAAATAAAACCAGTAGAACTTCCTAACTGTAAATTAGTAAAAGGAATAGAATCTGGC TCTGAAGACTTAGAGGTACTTCATAATGGACTGGCTTTCATTAGCACTGGATTAAAATAT CCTGGAATAAAGGTCTTTGAACCCGATAAGCCTGGAAAAATACTTCTGATGGACCTGAAT GAAGAGGATCCAACGGTGTTAGAATTAAGGATCACTGGAAGTAACTTTGATTTGTCTTCA TTTAACCCTCATGGAATTAGCACCTTCACAGATGAAGATAATACCGTGTACCTGCTAGTG GTGAGCCATCCAGATTTGAAGTCCACGGTTGAGTTGTTTAAATTTCAAGAAGAAGAAAAG ACACTTTTGCATCTGAAAACCATCAAACACAAACTTCTGCCTAAAATAAATGACATTGTC GCTGTGGGACCTGAACACTTCTATGCCACCAATGATCACTATTTTGTTGACACTTACCTG ACATTCTGGGAGATGTATTTGGGTCTAGCATGGTCATATGCTGTTTACTACAGTCCAAAT GAAGTTCAAGTGATGGCCAGTGGATTTGATTTTGCTAATGGAATCAACATCTCACCTGAT GGCAAGTATGTCTATATAGCTGAATCGATGGCTCATAAGATTCATGTGTATGAAAAGCAT GCTAATTGGACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCCATTCTTCCAAGGTCTGTCGGACCATGGCGAAGCTGATGGTGCTCACCCTCTTGGGG CTGGGGCTAGCACTCTTCAGGGATCATCGGTCTTCTTATCTTACAAGAATGAATGCTTTC CGAGAAATAAAACCAGTAGAACTTCCTAACTGTAAATTAGTAAAAGGAATAGAATCTGGC TCTGAAGACTTAGAGGTACTTCATAATGGACTGGCTTTCATTAGCACTGGATTAAAATAT CCTGGAATAAAGGTCTTTGAACCCGATAAGCCTGGAAAAATACTTCTGATGGACCTGAAT GAAGAGGATCCAACGGTGTTAGAATTAAGGATCACTGGAAGTAACTTTGATTTGTCTTCA TTTAACCCTCATGGAATTAGCACCTTCACAGATGAAGATAATACCGTGTACCTGCTAGTG GTGAGCCATCCAGATTTGAAGTCCACGGTTGAGTTGTTTAAATTTCAAGAAGAAGAAAAG ACACTTTTGCATCTGAAAACCATCAAACACAAACTTCTGCCTAAAATAAATGACATTGTC GCTGTGGGACCTGAACACTTCTATGCCACCAATGATCACTATTTTGTTGACACTTACCTG ACATTCTGGGAGATGTATTTGGGTCTAGCATGGTCATATGCTGTTTACTACAGTCCAAAT GAAGTTCAAGTGATGGCCAGTGGATTTGATTTTGCTAATGGAATCAACATCTCACCTGAT GGCAAGTATGTCTATATAGCTGAATCGATGGCTCATAAGATTCATGTGTATGAAAAGCAT GCTAATTGGACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 229-401, gnl|bosTau2|chr4 (2503326-2503154) | |
| 229-401, gnl|canFam2|chr14 (23536064-23536258) | |
| 229-401, gnl|danRer3|chr16 (28156448-28156610) | |
| 229-401, gnl|dasNov1|scaffold_125561 (35926-35751) | |
| 229-401, gnl|echTel1|scaffold_300779 (36990-36794) | |
| 229-401, gnl|fr1|chrUn (174840099-174840282) | |
| 229-401, gnl|galGal2|chr2 (23164353-23164533) | |
| 229-401, gnl|hg17|chr7 (94589282-94589477) | |
| 229-401, gnl|Hg17|chr7 (94589453-94589281) | |
| 229-401, gnl|loxAfr1|scaffold_230716 (344-539) | |
| 229-401, gnl|mm7|chr6 (5137629-5137823) | |
| 229-401, gnl|Mm7|chr6 (5137800-5137628) | |
| 229-401, gnl|oryCun1|scaffold_201457 (41777-41586) | |
| 229-401, gnl|panTro1|chr6 (96199203-96199398) | |
| 229-401, gnl|rheMac2|chr3 (121950261-121950066) | |
| 229-401, gnl|rn3|chr4 (29994172-29994365) | |
| 229-401, gnl|xenTro1|scaffold_640 (249046-248826) | |
| 529-731, gnl|bosTau2|chr4 (2493486-2493284) | |
| 529-731, gnl|canFam2|chr14 (23526819-23527000) | |
| 529-731, gnl|danRer3|chr16 (28155807-28156005) | |
| 529-731, gnl|dasNov1|scaffold_1333 (96764-96945) | |
| 529-731, gnl|echTel1|scaffold_300779 (44256-44075) | |
| 529-731, gnl|fr1|chrUn (174839046-174839227) | |
| 529-731, gnl|galGal2|chr2 (23162177-23162358) | |
| 529-731, gnl|hg17|chr7 (94581969-94582150) | |
| 529-731, gnl|Hg17|chr7 (94582170-94581968) | |
| 529-731, gnl|loxAfr1|scaffold_32673 (4723-4904) | |
| 529-731, gnl|mm7|chr6 (5130091-5130272) | |
| 529-731, gnl|Mm7|chr6 (5130292-5130090) | |
| 529-731, gnl|oryCun1|scaffold_173134 (30279-30098) | |
| 529-731, gnl|panTro1|chr6 (96191994-96192175) | |
| 529-731, gnl|rheMac2|chr3 (121957430-121957249) | |
| 529-731, gnl|rn3|chr4 (29986362-29986543) | |
| 529-731, gnl|tetNig1|chr8 (6231480-6231299) | |
| 529-731, gnl|xenTro1|scaffold_640 (250864-250683) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 229-401, gnl|bosTau2|chr4 (2503326-2503154) | |
| 229-401, gnl|canFam2|chr14 (23536064-23536258) | |
| 229-401, gnl|danRer3|chr16 (28156448-28156610) | |
| 229-401, gnl|dasNov1|scaffold_125561 (35926-35751) | |
| 229-401, gnl|echTel1|scaffold_300779 (36990-36794) | |
| 229-401, gnl|fr1|chrUn (174840099-174840282) | |
| 229-401, gnl|galGal2|chr2 (23164353-23164533) | |
| 229-401, gnl|hg17|chr7 (94589282-94589477) | |
| 229-401, gnl|Hg17|chr7 (94589453-94589281) | |
| 229-401, gnl|loxAfr1|scaffold_230716 (344-539) | |
| 229-401, gnl|mm7|chr6 (5137629-5137823) | |
| 229-401, gnl|Mm7|chr6 (5137800-5137628) | |
| 229-401, gnl|oryCun1|scaffold_201457 (41777-41586) | |
| 229-401, gnl|panTro1|chr6 (96199203-96199398) | |
| 229-401, gnl|rheMac2|chr3 (121950261-121950066) | |
| 229-401, gnl|rn3|chr4 (29994172-29994365) | |
| 229-401, gnl|xenTro1|scaffold_640 (249046-248826) | |
| 529-731, gnl|bosTau2|chr4 (2493486-2493284) | |
| 529-731, gnl|canFam2|chr14 (23526819-23527000) | |
| 529-731, gnl|danRer3|chr16 (28155807-28156005) | |
| 529-731, gnl|dasNov1|scaffold_1333 (96764-96945) | |
| 529-731, gnl|echTel1|scaffold_300779 (44256-44075) | |
| 529-731, gnl|fr1|chrUn (174839046-174839227) | |
| 529-731, gnl|galGal2|chr2 (23162177-23162358) | |
| 529-731, gnl|hg17|chr7 (94581969-94582150) | |
| 529-731, gnl|Hg17|chr7 (94582170-94581968) | |
| 529-731, gnl|loxAfr1|scaffold_32673 (4723-4904) | |
| 529-731, gnl|mm7|chr6 (5130091-5130272) | |
| 529-731, gnl|Mm7|chr6 (5130292-5130090) | |
| 529-731, gnl|oryCun1|scaffold_173134 (30279-30098) | |
| 529-731, gnl|panTro1|chr6 (96191994-96192175) | |
| 529-731, gnl|rheMac2|chr3 (121957430-121957249) | |
| 529-731, gnl|rn3|chr4 (29986362-29986543) | |
| 529-731, gnl|tetNig1|chr8 (6231480-6231299) | |
| 529-731, gnl|xenTro1|scaffold_640 (250864-250683) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.451467) | |
| kid (0.129735) | |
| ret (0.128733) |