Non-Coding RNA Search

Ss1.1-Pig1-68E14.5

Sequence:


               
               GAGCAGGATGGAAGTGGTTAGGTGTCCGCAGCATGGCACCTTATGCTTTCTGAAGACCGG
CGTCCGCGATGGCCCGAATAAAGGAAAGAGCTTCTACGTGTGCCCGGCGGACACATGCAA
CTTTCTGAGGGCCACTGAGTAGGTCTCGAGCTGGGCACAATTCCCTGCGACCGCGCGCCG
TCTCCCCGGTGGGGTCGCGGACTCCCCTCTGGCCAGCGCCATTAGGACTGGGAGAGCTGG
GACCCCTGGTCTGTGGAGCCATGGCCCTTTAATTAGTTGGTAATCTCAGGACAACTTGGC
ATGTTAGGGACACGCCCCGCTCTTGATTGCAGTGTGACCCAAGGCTGGTTACTTTGCCTC
TCTGGGCAGCCAATTCCCTCATAACATGGAGGATCGACTACATCTGGATCCTTCTGGTCC
TTTCCAGTTCTCGGTTTCTTTTTCGCCTGACAAGCCTTGATCACTCCCTTCTGATCAGAC
ATTACCCCCTACTCCATTTAAAGTGAGGACATAGAGGCGTAGCAGAAAATAACTGGCTCC
AGCTTTGCACTAGTAGTAGTCGGATTGACTGGCTCTTTTAAAAATAGGATTCTCTGCATT
TAAGTGGTGAAATTGTTAATCTAAGGAAACAAGTTATTTTAGGGATTAAGGCTGAAAGAA
ACATCAGAAATCTGATGCGGCAGTCTGGTTTTTACAGAGCTGAAAGTGAAACCCAGAAAT
ATTAAGCTTCTTTTTGGAAGTGAGAAAAGTTAATACTGTTCTCATAAAATGTTGTTAATG
TTTTCACAGTACCAGATGTTGGAAGTCTCTATGCGAAATTTTAAACTGTTATATCTTAAC
CATTTTTTTTCCTACTTTCTACTGAACTTGGTAGAGAAAAGGTATTTTTCTACATATCAT
GTAAGGCACATAATGGATATCAATATTGGAAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCAGGATGGAAGTGGTTAGGTGTCCGCAGCATGGCACCTTATGCTTTCTGAAGACCGG
CGTCCGCGATGGCCCGAATAAAGGAAAGAGCTTCTACGTGTGCCCGGCGGACACATGCAA
CTTTCTGAGGGCCACTGAGTAGGTCTCGAGCTGGGCACAATTCCCTGCGACCGCGCGCCG
TCTCCCCGGTGGGGTCGCGGACTCCCCTCTGGCCAGCGCCATTAGGACTGGGAGAGCTGG
GACCCCTGGTCTGTGGAGCCATGGCCCTTTAATTAGTTGGTAATCTCAGGACAACTTGGC
ATGTTAGGGACACGCCCCGCTCTTGATTGCAGTGTGACCCAAGGCTGGTTACTTTGCCTC
TCTGGGCAGCCAATTCCCTCATAACATGGAGGATCGACTACATCTGGATCCTTCTGGTCC
TTTCCAGTTCTCGGTTTCTTTTTCGCCTGACAAGCCTTGATCACTCCCTTCTGATCAGAC
ATTACCCCCTACTCCATTTAAAGTGAGGACATAGAGGCGTAGCAGAAAATAACTGGCTCC
AGCTTTGCACTAGTAGTAGTCGGATTGACTGGCTCTTTTAAAAATAGGATTCTCTGCATT
TAAGTGGTGAAATTGTTAATCTAAGGAAACAAGTTATTTTAGGGATTAAGGCTGAAAGAA
ACATCAGAAATCTGATGCGGCAGTCTGGTTTTTACAGAGCTGAAAGTGAAACCCAGAAAT
ATTAAGCTTCTTTTTGGAAGTGAGAAAAGTTAATACTGTTCTCATAAAATGTTGTTAATG
TTTTCACAGTACCAGATGTTGGAAGTCTCTATGCGAAATTTTAAACTGTTATATCTTAAC
CATTTTTTTTCCTACTTTCTACTGAACTTGGTAGAGAAAAGGTATTTTTCTACATATCAT
GTAAGGCACATAATGGATATCAATATTGGAAAATAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               35-564, gnl|bosTau2|chr3 (22181012-22181533)
               

               
               35-564, gnl|Hg17|chr1 (117315118-117315634)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-564, gnl|bosTau2|chr3 (22181012-22181533)
               

               
               35-564, gnl|Hg17|chr1 (117315118-117315634)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mga (0.160205)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               ret (0.128733)

	35-564, gnl\|bosTau2\|chr3 (22181012-22181533)
	35-564, gnl\|Hg17\|chr1 (117315118-117315634)