Ss1.1-Pig1-69F20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCACTCGCACCCTCCTCTCGGCAACCAGCTTCTTGCCAGCCACAGCCGCTGCCCCCTCAC TGCCCACTGCCCCCGTCCTGTGAGCCCAGACACCCACCCCACCCAGTGGCTCCTCTGCCG GAAAGGTGGCTGCCCCCTGCATTCCTCCATCCAACCGTGAACTGGTGCCCATCAACACTG AAACTGCCCCCAAGAATGTAGTGGACAAGGGAGAAGGAGCCTTCCGGGGTGGGAACACAC GGAAAAACCTTGAGGAAGACGGCTCCACCAGAGTCACGCCAAGTGTCCAGGCCCATCCCC AGCCCATCAGAAACATGAGTGTGAGCCGGAGCACGGAGGACAGCTGTGAGCTGGACCTGG TGTACGTCACGGAGCGGATTATCGCCGTCTCCTTCCCCAGCACAGCCAATGAGGACAACT TCCGCAGCAACCTCCGTGAGGTGGCCCAGATGCTCAAGTCCAAACATGGAGGCAACTACC TGCTTTTCAACCTCTCTGAGCGGAGACCTGACATCACGAGGCTCCATGCCAAGGTACTGG AATTCGGCTGGCCTGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAGTGTCTGCAAGG CCATGGACACTTGGCTCAACGCAGACCCCCACAATGTTGTCGTCCTACACAACAAGGGAA ACCGAGGCAGGATAGGTGTTGTGATCGCGGCTTACATGCACTACAGCAACATTTCTGCCA GTGCTGACCAGGCCCTGGACCGGTTTGCCATGAAGCGGTTCTATGAGGATAAGATTGTAC CCATTGGCCAGCCGTCCCAGAGAAGGTACGTGCATTATTTCAGCGGCCTGCTCTCTGGCT CCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCA ACTTCGAGTCTAAAGGAGGGTGTCGGCCATTTCTCCGGATCTACCAGGCTATGCAACCTG TCTACACGTCTGGCATCTACAACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCACTCGCACCCTCCTCTCGGCAACCAGCTTCTTGCCAGCCACAGCCGCTGCCCCCTCAC TGCCCACTGCCCCCGTCCTGTGAGCCCAGACACCCACCCCACCCAGTGGCTCCTCTGCCG GAAAGGTGGCTGCCCCCTGCATTCCTCCATCCAACCGTGAACTGGTGCCCATCAACACTG AAACTGCCCCCAAGAATGTAGTGGACAAGGGAGAAGGAGCCTTCCGGGGTGGGAACACAC GGAAAAACCTTGAGGAAGACGGCTCCACCAGAGTCACGCCAAGTGTCCAGGCCCATCCCC AGCCCATCAGAAACATGAGTGTGAGCCGGAGCACGGAGGACAGCTGTGAGCTGGACCTGG TGTACGTCACGGAGCGGATTATCGCCGTCTCCTTCCCCAGCACAGCCAATGAGGACAACT TCCGCAGCAACCTCCGTGAGGTGGCCCAGATGCTCAAGTCCAAACATGGAGGCAACTACC TGCTTTTCAACCTCTCTGAGCGGAGACCTGACATCACGAGGCTCCATGCCAAGGTACTGG AATTCGGCTGGCCTGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAGTGTCTGCAAGG CCATGGACACTTGGCTCAACGCAGACCCCCACAATGTTGTCGTCCTACACAACAAGGGAA ACCGAGGCAGGATAGGTGTTGTGATCGCGGCTTACATGCACTACAGCAACATTTCTGCCA GTGCTGACCAGGCCCTGGACCGGTTTGCCATGAAGCGGTTCTATGAGGATAAGATTGTAC CCATTGGCCAGCCGTCCCAGAGAAGGTACGTGCATTATTTCAGCGGCCTGCTCTCTGGCT CCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCA ACTTCGAGTCTAAAGGAGGGTGTCGGCCATTTCTCCGGATCTACCAGGCTATGCAACCTG TCTACACGTCTGGCATCTACAACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 1-128, gnl|bosTau2|chr2 (63493802-63493675) | |
| 1-128, gnl|Hg17|chr2 (218634230-218634091) | |
| 1-128, gnl|Mm7|chr1 (74279320-74279218) | |
| 308-482, gnl|bosTau2|chr2 (63445677-63445503) | |
| 308-482, gnl|canFam2|chr37 (27669364-27669567) | |
| 308-482, gnl|danRer3|chr17 (40697090-40697273) | |
| 308-482, gnl|dasNov1|scaffold_206203 (925-721) | |
| 308-482, gnl|echTel1|scaffold_207133 (1228-1016) | |
| 308-482, gnl|fr1|chrUn (40383660-40383850) | |
| 308-482, gnl|galGal2|chr7 (23326800-23326580) | |
| 308-482, gnl|hg17|chr2 (218588019-218588223) | |
| 308-482, gnl|Hg17|chr2 (218588201-218588027) | |
| 308-482, gnl|loxAfr1|scaffold_47541 (16345-16137) | |
| 308-482, gnl|mm7|chr1 (74237447-74237646) | |
| 308-482, gnl|Mm7|chr1 (74237625-74237451) | |
| 308-482, gnl|monDom2|scaffold_39 (2776958-2776756) | |
| 308-482, gnl|panTro1|chr13 (108745325-108745529) | |
| 308-482, gnl|rheMac2|chr12 (81709391-81709595) | |
| 308-482, gnl|rn3|chr9 (73462194-73462393) | |
| 308-482, gnl|tetNig1|chr3 (1737284-1737474) | |
| 308-482, gnl|xenTro1|scaffold_471 (800040-800237) | |
| 528-657, gnl|bosTau2|chr2 (63441238-63441108) | |
| 528-657, gnl|canFam2|chr37 (27665801-27665928) | |
| 528-657, gnl|danRer3|chr17 (40696506-40696632) | |
| 528-657, gnl|dasNov1|scaffold_186074 (3394-3266) | |
| 528-657, gnl|echTel1|scaffold_207133 (3112-2985) | |
| 528-657, gnl|fr1|chrUn (40383193-40383320) | |
| 528-657, gnl|galGal2|chr7 (23327711-23327584) | |
| 528-657, gnl|hg17|chr2 (218583667-218583794) | |
| 528-657, gnl|Hg17|chr2 (218583797-218583667) | |
| 528-657, gnl|loxAfr1|scaffold_47541 (20458-20331) | |
| 528-657, gnl|mm7|chr1 (74234349-74234476) | |
| 528-657, gnl|Mm7|chr1 (74234478-74234349) | |
| 528-657, gnl|monDom2|scaffold_39 (2781427-2781300) | |
| 528-657, gnl|oryCun1|scaffold_211769 (12475-12602) | |
| 528-657, gnl|panTro1|chr13 (108740963-108741090) | |
| 528-657, gnl|rheMac2|chr12 (81705030-81705157) | |
| 528-657, gnl|rn3|chr9 (73459328-73459455) | |
| 528-657, gnl|tetNig1|chr3 (1736953-1737079) | |
| 528-657, gnl|xenTro1|scaffold_471 (797516-797643) | |
| 804-919, gnl|bosTau2|chr2 (63435951-63435836) | |
| 804-919, gnl|canFam2|chr37 (27660412-27660558) | |
| 804-919, gnl|danRer3|chr17 (40684293-40684425) | |
| 804-919, gnl|dasNov1|scaffold_12944 (2970-2851) | |
| 804-919, gnl|echTel1|scaffold_286391 (38135-38278) | |
| 804-919, gnl|fr1|chrUn (40379516-40379633) | |
| 804-919, gnl|galGal2|chr7 (23328423-23328281) | |
| 804-919, gnl|hg17|chr2 (218576762-218576906) | |
| 804-919, gnl|Hg17|chr2 (218576877-218576762) | |
| 804-919, gnl|loxAfr1|scaffold_9897 (3049-2905) | |
| 804-919, gnl|mm7|chr1 (74228512-74228630) | |
| 804-919, gnl|Mm7|chr1 (74228627-74228512) | |
| 804-919, gnl|monDom2|scaffold_39 (2792082-2791956) | |
| 804-919, gnl|oryCun1|scaffold_211769 (7776-7919) | |
| 804-919, gnl|panTro1|chr13 (108734072-108734216) | |
| 804-919, gnl|rheMac2|chr12 (81698157-81698301) | |
| 804-919, gnl|rn3|chr9 (73453547-73453665) | |
| 804-919, gnl|tetNig1|chr3 (1734954-1735071) | |
| 804-919, gnl|xenTro1|scaffold_471 (795708-795849) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-128, gnl|bosTau2|chr2 (63493802-63493675) | |
| 1-128, gnl|Hg17|chr2 (218634230-218634091) | |
| 1-128, gnl|Mm7|chr1 (74279320-74279218) | |
| 308-482, gnl|bosTau2|chr2 (63445677-63445503) | |
| 308-482, gnl|canFam2|chr37 (27669364-27669567) | |
| 308-482, gnl|danRer3|chr17 (40697090-40697273) | |
| 308-482, gnl|dasNov1|scaffold_206203 (925-721) | |
| 308-482, gnl|echTel1|scaffold_207133 (1228-1016) | |
| 308-482, gnl|fr1|chrUn (40383660-40383850) | |
| 308-482, gnl|galGal2|chr7 (23326800-23326580) | |
| 308-482, gnl|hg17|chr2 (218588019-218588223) | |
| 308-482, gnl|Hg17|chr2 (218588201-218588027) | |
| 308-482, gnl|loxAfr1|scaffold_47541 (16345-16137) | |
| 308-482, gnl|mm7|chr1 (74237447-74237646) | |
| 308-482, gnl|Mm7|chr1 (74237625-74237451) | |
| 308-482, gnl|monDom2|scaffold_39 (2776958-2776756) | |
| 308-482, gnl|panTro1|chr13 (108745325-108745529) | |
| 308-482, gnl|rheMac2|chr12 (81709391-81709595) | |
| 308-482, gnl|rn3|chr9 (73462194-73462393) | |
| 308-482, gnl|tetNig1|chr3 (1737284-1737474) | |
| 308-482, gnl|xenTro1|scaffold_471 (800040-800237) | |
| 528-657, gnl|bosTau2|chr2 (63441238-63441108) | |
| 528-657, gnl|canFam2|chr37 (27665801-27665928) | |
| 528-657, gnl|danRer3|chr17 (40696506-40696632) | |
| 528-657, gnl|dasNov1|scaffold_186074 (3394-3266) | |
| 528-657, gnl|echTel1|scaffold_207133 (3112-2985) | |
| 528-657, gnl|fr1|chrUn (40383193-40383320) | |
| 528-657, gnl|galGal2|chr7 (23327711-23327584) | |
| 528-657, gnl|hg17|chr2 (218583667-218583794) | |
| 528-657, gnl|Hg17|chr2 (218583797-218583667) | |
| 528-657, gnl|loxAfr1|scaffold_47541 (20458-20331) | |
| 528-657, gnl|mm7|chr1 (74234349-74234476) | |
| 528-657, gnl|Mm7|chr1 (74234478-74234349) | |
| 528-657, gnl|monDom2|scaffold_39 (2781427-2781300) | |
| 528-657, gnl|oryCun1|scaffold_211769 (12475-12602) | |
| 528-657, gnl|panTro1|chr13 (108740963-108741090) | |
| 528-657, gnl|rheMac2|chr12 (81705030-81705157) | |
| 528-657, gnl|rn3|chr9 (73459328-73459455) | |
| 528-657, gnl|tetNig1|chr3 (1736953-1737079) | |
| 528-657, gnl|xenTro1|scaffold_471 (797516-797643) | |
| 804-919, gnl|bosTau2|chr2 (63435951-63435836) | |
| 804-919, gnl|canFam2|chr37 (27660412-27660558) | |
| 804-919, gnl|danRer3|chr17 (40684293-40684425) | |
| 804-919, gnl|dasNov1|scaffold_12944 (2970-2851) | |
| 804-919, gnl|echTel1|scaffold_286391 (38135-38278) | |
| 804-919, gnl|fr1|chrUn (40379516-40379633) | |
| 804-919, gnl|galGal2|chr7 (23328423-23328281) | |
| 804-919, gnl|hg17|chr2 (218576762-218576906) | |
| 804-919, gnl|Hg17|chr2 (218576877-218576762) | |
| 804-919, gnl|loxAfr1|scaffold_9897 (3049-2905) | |
| 804-919, gnl|mm7|chr1 (74228512-74228630) | |
| 804-919, gnl|Mm7|chr1 (74228627-74228512) | |
| 804-919, gnl|monDom2|scaffold_39 (2792082-2791956) | |
| 804-919, gnl|oryCun1|scaffold_211769 (7776-7919) | |
| 804-919, gnl|panTro1|chr13 (108734072-108734216) | |
| 804-919, gnl|rheMac2|chr12 (81698157-81698301) | |
| 804-919, gnl|rn3|chr9 (73453547-73453665) | |
| 804-919, gnl|tetNig1|chr3 (1734954-1735071) | |
| 804-919, gnl|xenTro1|scaffold_471 (795708-795849) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |