Ss1.1-Pig1-69K21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGATGAACTGGACAGCCACTTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTAC ATGGTGAACCGCGTGCAGGACCACATCCAGAGCCGCACAGTCTACTATCTCATGAACATC CATGTCACACCCCGCTCCATCTACCTATGCCGGCACGGTGAGAGTGAACTCAACCTCAGA GGCCGCATCGGAGGTGACTCTGGCCTCTCACCTCGGGGCAAGCAGTATGCCTATGCCTTG GCCGACTTCATTAAGTCCCAGGCCATCAGCTCCCTGAAGGTGTGGACCAGCCACATGAAG AGGACTATCCAGACAGCTGAAGCCCTGGATGTCCCCTATGAGCAGTGGAAGGCCCTGAAT GAGATTGATGCGGGTGTCTGTGAAGAAATGACATATGAGGAAATCCAAGAGCACTATCCC GAAGAATTTGCCCTACGAGACCAAGATAAATATCGCTACCGCTATCCCAAGGGAGAGTCC TATGAAGATCTGGTCCAGCGTCTGGAGCCAGTTATAATGGAGCTAGAACGTCAGGAAAAT GTATTAGTGATTTGCCACCAGGCTGTCATGCGGTGCCTCCTGGCCTACTTCCTGGACAAG AGCTCAGATGAGCTGCCATATCTCAAGTGCCCTCTGCACACAGTGCTCAAACTTACGCCT GTGGCTTATGGCTGCAAAGTGGAGTCGATCTACCTGAATGTGGAGGCTGTCAACACACAC CGGGAGAAGCCTGAGAATGTAGACATCACCCGAGAACCTGAGGAAGCTCTGGACACAGTC CCTGCCCACTACTGAGCACTTTCTAAGACATCAAACTTCCTCTGTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGATGAACTGGACAGCCACTTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTAC ATGGTGAACCGCGTGCAGGACCACATCCAGAGCCGCACAGTCTACTATCTCATGAACATC CATGTCACACCCCGCTCCATCTACCTATGCCGGCACGGTGAGAGTGAACTCAACCTCAGA GGCCGCATCGGAGGTGACTCTGGCCTCTCACCTCGGGGCAAGCAGTATGCCTATGCCTTG GCCGACTTCATTAAGTCCCAGGCCATCAGCTCCCTGAAGGTGTGGACCAGCCACATGAAG AGGACTATCCAGACAGCTGAAGCCCTGGATGTCCCCTATGAGCAGTGGAAGGCCCTGAAT GAGATTGATGCGGGTGTCTGTGAAGAAATGACATATGAGGAAATCCAAGAGCACTATCCC GAAGAATTTGCCCTACGAGACCAAGATAAATATCGCTACCGCTATCCCAAGGGAGAGTCC TATGAAGATCTGGTCCAGCGTCTGGAGCCAGTTATAATGGAGCTAGAACGTCAGGAAAAT GTATTAGTGATTTGCCACCAGGCTGTCATGCGGTGCCTCCTGGCCTACTTCCTGGACAAG AGCTCAGATGAGCTGCCATATCTCAAGTGCCCTCTGCACACAGTGCTCAAACTTACGCCT GTGGCTTATGGCTGCAAAGTGGAGTCGATCTACCTGAATGTGGAGGCTGTCAACACACAC CGGGAGAAGCCTGAGAATGTAGACATCACCCGAGAACCTGAGGAAGCTCTGGACACAGTC CCTGCCCACTACTGAGCACTTTCTAAGACATCAAACTTCCTCTGTCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 15-225, gnl|bosTau2|chr13 (13157973-13158183) | |
| 15-225, gnl|canFam2|chr2 (32585530-32585310) | |
| 15-225, gnl|danRer3|chr4 (22671832-22672050) | |
| 15-225, gnl|dasNov1|scaffold_5005 (54093-54291) | |
| 15-225, gnl|echTel1|scaffold_200777 (1872-1654) | |
| 15-225, gnl|fr1|chrUn (280041185-280040967) | |
| 15-225, gnl|galGal2|chr1 (34628-34408) | |
| 15-225, gnl|hg17|chr10 (6302619-6302839) | |
| 15-225, gnl|Hg17|chr10 (6302624-6302834) | |
| 15-225, gnl|loxAfr1|scaffold_57652 (5672-5480) | |
| 15-225, gnl|mm7|chr2 (11424030-11423810) | |
| 15-225, gnl|Mm7|chr2 (11424023-11423813) | |
| 15-225, gnl|monDom2|scaffold_30 (2340012-2340231) | |
| 15-225, gnl|oryCun1|scaffold_208478 (55201-55421) | |
| 15-225, gnl|panTro1|chr8 (6390554-6390774) | |
| 15-225, gnl|rheMac2|chr9 (6504408-6504628) | |
| 15-225, gnl|rn3|chr17 (78268498-78268718) | |
| 15-225, gnl|tetNig1|chrUn_random (54851773-54851573) | |
| 15-225, gnl|xenTro1|scaffold_20 (187618-187401) | |
| 476-610, gnl|bosTau2|chr13 (13160469-13160603) | |
| 476-610, gnl|canFam2|chr2 (32583219-32583080) | |
| 476-610, gnl|danRer3|chr4 (22672671-22672805) | |
| 476-610, gnl|dasNov1|scaffold_23443 (1407-1546) | |
| 476-610, gnl|echTel1|scaffold_297968 (7556-7695) | |
| 476-610, gnl|fr1|chrUn (280040422-280040288) | |
| 476-610, gnl|galGal2|chr1 (32266-32127) | |
| 476-610, gnl|hg17|chr10 (6304822-6304961) | |
| 476-610, gnl|Hg17|chr10 (6304822-6304956) | |
| 476-610, gnl|loxAfr1|scaffold_31854 (7757-7618) | |
| 476-610, gnl|mm7|chr2 (11421736-11421597) | |
| 476-610, gnl|Mm7|chr2 (11421734-11421600) | |
| 476-610, gnl|monDom2|scaffold_30 (2342599-2342738) | |
| 476-610, gnl|oryCun1|scaffold_208478 (58034-58173) | |
| 476-610, gnl|panTro1|chr8 (6392750-6392889) | |
| 476-610, gnl|rheMac2|chr9 (6506580-6506719) | |
| 476-610, gnl|rn3|chr17 (78270773-78270912) | |
| 476-610, gnl|tetNig1|chrUn_random (54851085-54850952) | |
| 476-610, gnl|xenTro1|scaffold_20 (186090-185957) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-225, gnl|bosTau2|chr13 (13157973-13158183) | |
| 15-225, gnl|canFam2|chr2 (32585530-32585310) | |
| 15-225, gnl|danRer3|chr4 (22671832-22672050) | |
| 15-225, gnl|dasNov1|scaffold_5005 (54093-54291) | |
| 15-225, gnl|echTel1|scaffold_200777 (1872-1654) | |
| 15-225, gnl|fr1|chrUn (280041185-280040967) | |
| 15-225, gnl|galGal2|chr1 (34628-34408) | |
| 15-225, gnl|hg17|chr10 (6302619-6302839) | |
| 15-225, gnl|Hg17|chr10 (6302624-6302834) | |
| 15-225, gnl|loxAfr1|scaffold_57652 (5672-5480) | |
| 15-225, gnl|mm7|chr2 (11424030-11423810) | |
| 15-225, gnl|Mm7|chr2 (11424023-11423813) | |
| 15-225, gnl|monDom2|scaffold_30 (2340012-2340231) | |
| 15-225, gnl|oryCun1|scaffold_208478 (55201-55421) | |
| 15-225, gnl|panTro1|chr8 (6390554-6390774) | |
| 15-225, gnl|rheMac2|chr9 (6504408-6504628) | |
| 15-225, gnl|rn3|chr17 (78268498-78268718) | |
| 15-225, gnl|tetNig1|chrUn_random (54851773-54851573) | |
| 15-225, gnl|xenTro1|scaffold_20 (187618-187401) | |
| 476-610, gnl|bosTau2|chr13 (13160469-13160603) | |
| 476-610, gnl|canFam2|chr2 (32583219-32583080) | |
| 476-610, gnl|danRer3|chr4 (22672671-22672805) | |
| 476-610, gnl|dasNov1|scaffold_23443 (1407-1546) | |
| 476-610, gnl|echTel1|scaffold_297968 (7556-7695) | |
| 476-610, gnl|fr1|chrUn (280040422-280040288) | |
| 476-610, gnl|galGal2|chr1 (32266-32127) | |
| 476-610, gnl|hg17|chr10 (6304822-6304961) | |
| 476-610, gnl|Hg17|chr10 (6304822-6304956) | |
| 476-610, gnl|loxAfr1|scaffold_31854 (7757-7618) | |
| 476-610, gnl|mm7|chr2 (11421736-11421597) | |
| 476-610, gnl|Mm7|chr2 (11421734-11421600) | |
| 476-610, gnl|monDom2|scaffold_30 (2342599-2342738) | |
| 476-610, gnl|oryCun1|scaffold_208478 (58034-58173) | |
| 476-610, gnl|panTro1|chr8 (6392750-6392889) | |
| 476-610, gnl|rheMac2|chr9 (6506580-6506719) | |
| 476-610, gnl|rn3|chr17 (78270773-78270912) | |
| 476-610, gnl|tetNig1|chrUn_random (54851085-54850952) | |
| 476-610, gnl|xenTro1|scaffold_20 (186090-185957) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fli (0.202881) | |
| ssp (0.13552) | |
| ste (0.135208) | |
| ldo (0.0970026) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) | |
| ssp (0.13552) | |
| ste (0.135208) | |
| ldo (0.0970026) |