Ss1.1-Pig1-70L09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAATGGACGTGACTTCTTATTGGCGCTGGAGCGCCAGGGCCGCTGTGATGAGAGTAAC TTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACCTGCTGCCCTACGTC ACCCTCAAGAGGAGACGGGCTGTGTGCCCTGATCTCGTAGACAAGTATCTGGAGGAGACA TCAGTTCGCTATGTGACACCCAGAACCCTCAGTGATCCAGAACCGAGGCCTCCCCACCCC CCTAAAACAGTGCCTCCCCACTATCCTGTGGTGTGCTGCCCCACTTCGGGCCCTCAGATG TGTAGCAAGCGGCCAGCTCGAGGGAGAGCCACACTTGGGAGCCAGCGAAAACGCCGGAAG TCAGTGACACCAGATCCCAAGGAAAAGCAGACATGTGACATCAGGCTGCGAGTTCGGGCT GAATACTGCCAGCATGAGACTGCTCTACAGGGGAATGTCTTCTCTAACAAGCAGGACCCA CTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACACCATCCTCAAGTCCCGGGACCTG GGCTCCATCATCTGTGACATCAAGTTCTCTGAGCTCACCTACCTCGACGCATTCTGGCGC GACTACATCAATGGCTCGTTACTAGAGGCACTTAAAGGTGTCTTCATCACAGACTCCCTC AAGCAGGCTGTGGGCCATGAAGCCATCAAGCTGCTGGTGAATGTGGATGAGGAGGACTAT GAGCTGGGCCGACAAAAACTCCTGAGGAACTTGATGCTGCAAGCATTGCCCTGACCTTTT CCCCCCCTCTCACTTCTTTGGGGACTTCTCAGCACCCACCTCTGGAGCTTACATACTGTT CTGGGGTTTGTTCTCTACCCTTTCAACCAATCACACCCCTGCCTTTTTTTTTTTTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAATGGACGTGACTTCTTATTGGCGCTGGAGCGCCAGGGCCGCTGTGATGAGAGTAAC TTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACCTGCTGCCCTACGTC ACCCTCAAGAGGAGACGGGCTGTGTGCCCTGATCTCGTAGACAAGTATCTGGAGGAGACA TCAGTTCGCTATGTGACACCCAGAACCCTCAGTGATCCAGAACCGAGGCCTCCCCACCCC CCTAAAACAGTGCCTCCCCACTATCCTGTGGTGTGCTGCCCCACTTCGGGCCCTCAGATG TGTAGCAAGCGGCCAGCTCGAGGGAGAGCCACACTTGGGAGCCAGCGAAAACGCCGGAAG TCAGTGACACCAGATCCCAAGGAAAAGCAGACATGTGACATCAGGCTGCGAGTTCGGGCT GAATACTGCCAGCATGAGACTGCTCTACAGGGGAATGTCTTCTCTAACAAGCAGGACCCA CTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACACCATCCTCAAGTCCCGGGACCTG GGCTCCATCATCTGTGACATCAAGTTCTCTGAGCTCACCTACCTCGACGCATTCTGGCGC GACTACATCAATGGCTCGTTACTAGAGGCACTTAAAGGTGTCTTCATCACAGACTCCCTC AAGCAGGCTGTGGGCCATGAAGCCATCAAGCTGCTGGTGAATGTGGATGAGGAGGACTAT GAGCTGGGCCGACAAAAACTCCTGAGGAACTTGATGCTGCAAGCATTGCCCTGACCTTTT CCCCCCCTCTCACTTCTTTGGGGACTTCTCAGCACCCACCTCTGGAGCTTACATACTGTT CTGGGGTTTGTTCTCTACCCTTTCAACCAATCACACCCCTGCCTTTTTTTTTTTTTTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-142, gnl|bosTau2|chr3 (7891739-7891880) | |
| 1-142, gnl|canFam2|chr38 (24348076-24347919) | |
| 1-142, gnl|danRer3|chr8 (6650850-6651004) | |
| 1-142, gnl|dasNov1|scaffold_14023 (77950-77793) | |
| 1-142, gnl|echTel1|scaffold_297025 (49732-49889) | |
| 1-142, gnl|fr1|chrUn (100149941-100149777) | |
| 1-142, gnl|galGal2|chrUn (71296930-71297087) | |
| 1-142, gnl|hg17|chr1 (157906997-157907154) | |
| 1-142, gnl|Hg17|chr1 (157907142-157907001) | |
| 1-142, gnl|loxAfr1|scaffold_11180 (72959-73116) | |
| 1-142, gnl|mm7|chr1 (171308739-171308582) | |
| 1-142, gnl|Mm7|chr1 (171308592-171308733) | |
| 1-142, gnl|monDom2|scaffold_0 (28727137-28726980) | |
| 1-142, gnl|oryCun1|scaffold_194601 (116345-116496) | |
| 1-142, gnl|panTro1|chr1 (139974456-139974613) | |
| 1-142, gnl|rheMac2|chr1 (139734388-139734545) | |
| 1-142, gnl|rn3|chr13 (87427579-87427422) | |
| 1-142, gnl|tetNig1|chrUn_random (82394166-82394320) | |
| 1-142, gnl|xenTro1|scaffold_1032 (358073-357916) | |
| 248-395, gnl|bosTau2|chr3 (7892479-7892626) | |
| 248-395, gnl|canFam2|chr38 (24349597-24349458) | |
| 248-395, gnl|dasNov1|scaffold_14023 (78707-78568) | |
| 248-395, gnl|galGal2|chrUn (71294119-71294266) | |
| 248-395, gnl|hg17|chr1 (157905932-157906071) | |
| 248-395, gnl|Hg17|chr1 (157906087-157905940) | |
| 248-395, gnl|loxAfr1|scaffold_11180 (72158-72296) | |
| 248-395, gnl|mm7|chr1 (171310440-171310301) | |
| 248-395, gnl|Mm7|chr1 (171310283-171310430) | |
| 248-395, gnl|monDom2|scaffold_0 (28727960-28727821) | |
| 248-395, gnl|oryCun1|scaffold_208402 (103849-103710) | |
| 248-395, gnl|panTro1|chr1 (139973387-139973526) | |
| 248-395, gnl|rheMac2|chr1 (139733627-139733766) | |
| 248-395, gnl|rn3|chr13 (87429613-87429474) | |
| 248-395, gnl|tetNig1|chrUn_random (82393583-82393719) | |
| 248-395, gnl|xenTro1|scaffold_1032 (361208-361069) | |
| 397-731, gnl|bosTau2|chr18 (44924681-44924347) | |
| 397-731, gnl|Hg17|chr19 (47395822-47395488) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-142, gnl|bosTau2|chr3 (7891739-7891880) | |
| 1-142, gnl|canFam2|chr38 (24348076-24347919) | |
| 1-142, gnl|danRer3|chr8 (6650850-6651004) | |
| 1-142, gnl|dasNov1|scaffold_14023 (77950-77793) | |
| 1-142, gnl|echTel1|scaffold_297025 (49732-49889) | |
| 1-142, gnl|fr1|chrUn (100149941-100149777) | |
| 1-142, gnl|galGal2|chrUn (71296930-71297087) | |
| 1-142, gnl|hg17|chr1 (157906997-157907154) | |
| 1-142, gnl|Hg17|chr1 (157907142-157907001) | |
| 1-142, gnl|loxAfr1|scaffold_11180 (72959-73116) | |
| 1-142, gnl|mm7|chr1 (171308739-171308582) | |
| 1-142, gnl|Mm7|chr1 (171308592-171308733) | |
| 1-142, gnl|monDom2|scaffold_0 (28727137-28726980) | |
| 1-142, gnl|oryCun1|scaffold_194601 (116345-116496) | |
| 1-142, gnl|panTro1|chr1 (139974456-139974613) | |
| 1-142, gnl|rheMac2|chr1 (139734388-139734545) | |
| 1-142, gnl|rn3|chr13 (87427579-87427422) | |
| 1-142, gnl|tetNig1|chrUn_random (82394166-82394320) | |
| 1-142, gnl|xenTro1|scaffold_1032 (358073-357916) | |
| 248-395, gnl|bosTau2|chr3 (7892479-7892626) | |
| 248-395, gnl|canFam2|chr38 (24349597-24349458) | |
| 248-395, gnl|dasNov1|scaffold_14023 (78707-78568) | |
| 248-395, gnl|galGal2|chrUn (71294119-71294266) | |
| 248-395, gnl|hg17|chr1 (157905932-157906071) | |
| 248-395, gnl|Hg17|chr1 (157906087-157905940) | |
| 248-395, gnl|loxAfr1|scaffold_11180 (72158-72296) | |
| 248-395, gnl|mm7|chr1 (171310440-171310301) | |
| 248-395, gnl|Mm7|chr1 (171310283-171310430) | |
| 248-395, gnl|monDom2|scaffold_0 (28727960-28727821) | |
| 248-395, gnl|oryCun1|scaffold_208402 (103849-103710) | |
| 248-395, gnl|panTro1|chr1 (139973387-139973526) | |
| 248-395, gnl|rheMac2|chr1 (139733627-139733766) | |
| 248-395, gnl|rn3|chr13 (87429613-87429474) | |
| 248-395, gnl|tetNig1|chrUn_random (82393583-82393719) | |
| 248-395, gnl|xenTro1|scaffold_1032 (361208-361069) | |
| 397-731, gnl|bosTau2|chr18 (44924681-44924347) | |
| 397-731, gnl|Hg17|chr19 (47395822-47395488) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) | |
| cag (0.151194) |