Non-Coding RNA Search

Ss1.1-Pig1-71G22.5

Sequence:


               
               GGGAATTACACCCCCTACAAGTACACCACGGTGGGGGGTTGCTGAAAAGACCTTCAGGCC
TCCTTATTACCACAGGAACTGCATGAGTGAATTCATGGGACTCATCAAAGGTCACTATGA
GGCAAAGCAAGGTGGGTTCCTGCCAGGGGGAGGCAGCTTGCACAGTCCAATGACCCCCCA
CGGGCCTGATGCCGACTGCTTTGAAAAGGCCAGCAAAGCCAGGCTGGTCCCTGAGCGGAT
TGCTGATGGCACCATGGCATTTATGTTTGAGTCTTCTCTAAGTATGGCTGTCACCAGGTG
GGGGCTAAAGACCTCTAATTGTTTGGATGAAAACTACTACAAATGCTGGGAACCTCTCAA
GAGCCATTTCACCCCCAATTCCAGGAACGCTGCAGGACCTAATTGAGACTGGAGCCTTGC
TACCATCATTGAGAACGGATTTGTGCCATTTCCTTTAGAATCTCACACCCTTTGGCAGTA
CTGGGGGAGGGAGTTGGTTAAAATGAGAACTCACTTTTTCAGTCAAGTAGCTCATTTATA
GAAATGTATTTGGAAAGCTATCAGCGTAATTACTCAATAAATACTTGCTGGTGTTCTGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAATTACACCCCCTACAAGTACACCACGGTGGGGGGTTGCTGAAAAGACCTTCAGGCC
TCCTTATTACCACAGGAACTGCATGAGTGAATTCATGGGACTCATCAAAGGTCACTATGA
GGCAAAGCAAGGTGGGTTCCTGCCAGGGGGAGGCAGCTTGCACAGTCCAATGACCCCCCA
CGGGCCTGATGCCGACTGCTTTGAAAAGGCCAGCAAAGCCAGGCTGGTCCCTGAGCGGAT
TGCTGATGGCACCATGGCATTTATGTTTGAGTCTTCTCTAAGTATGGCTGTCACCAGGTG
GGGGCTAAAGACCTCTAATTGTTTGGATGAAAACTACTACAAATGCTGGGAACCTCTCAA
GAGCCATTTCACCCCCAATTCCAGGAACGCTGCAGGACCTAATTGAGACTGGAGCCTTGC
TACCATCATTGAGAACGGATTTGTGCCATTTCCTTTAGAATCTCACACCCTTTGGCAGTA
CTGGGGGAGGGAGTTGGTTAAAATGAGAACTCACTTTTTCAGTCAAGTAGCTCATTTATA
GAAATGTATTTGGAAAGCTATCAGCGTAATTACTCAATAAATACTTGCTGGTGTTCTGCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               256-598, gnl|bosTau2|chr1 (30919910-30919565)
               

               
               256-598, gnl|Hg17|chr3 (121830067-121829713)
               

               
               256-598, gnl|Mm7|chr16 (37340054-37340394)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               256-598, gnl|bosTau2|chr1 (30919910-30919565)
               

               
               256-598, gnl|Hg17|chr3 (121830067-121829713)
               

               
               256-598, gnl|Mm7|chr16 (37340054-37340394)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cli (0.458435)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.458435)

	256-598, gnl\|bosTau2\|chr1 (30919910-30919565)
	256-598, gnl\|Hg17\|chr3 (121830067-121829713)
	256-598, gnl\|Mm7\|chr16 (37340054-37340394)