Non-Coding RNA Search

Ss1.1-Pig1-72D04.5

Sequence:


               
               TCACTGGAAGAGACATCAACTTACTCACTTTAAGGAATGATCACAGGAGAAAATGGTTGA
CCTTGTTCTTTAGCCTGTTAATCGTTTAAAATACATATTTTTATCAGCAGGCCTGCATTA
GATTGAACGATTTCATAGGCAGTTGTTTGTCCTGCATGGTAAGAGGTAAGATACAGAAAT
TTAATGCAATGTTTTAGAAACAACCAGATTAATTATTAGAGGGAAGAGCATGATTTGATG
CCATAAAGCAAGCATTTATTTTATTTTAATATATACTTTGGCTCTATTAAAAATGTTGAA
GTCCATGATATGGTACAAACAATTCAGCCTCATTTTTAAAGGAATTATTACTTAAGATCT
GCCATCTCCTTTTATATTATACTCAGAAGACTGAGAGGCAAAAATTGGTTTTGGGCCACA
GCCCCACTGTATTTCGTGTATTTTATACCTATGGCTCAAATTCCATTGCAAGATTTTTTT
TTATAAGTTTAAAAAACAAAGACAATAAAAATGAAAATGGATGAGAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACTGGAAGAGACATCAACTTACTCACTTTAAGGAATGATCACAGGAGAAAATGGTTGA
CCTTGTTCTTTAGCCTGTTAATCGTTTAAAATACATATTTTTATCAGCAGGCCTGCATTA
GATTGAACGATTTCATAGGCAGTTGTTTGTCCTGCATGGTAAGAGGTAAGATACAGAAAT
TTAATGCAATGTTTTAGAAACAACCAGATTAATTATTAGAGGGAAGAGCATGATTTGATG
CCATAAAGCAAGCATTTATTTTATTTTAATATATACTTTGGCTCTATTAAAAATGTTGAA
GTCCATGATATGGTACAAACAATTCAGCCTCATTTTTAAAGGAATTATTACTTAAGATCT
GCCATCTCCTTTTATATTATACTCAGAAGACTGAGAGGCAAAAATTGGTTTTGGGCCACA
GCCCCACTGTATTTCGTGTATTTTATACCTATGGCTCAAATTCCATTGCAAGATTTTTTT
TTATAAGTTTAAAAAACAAAGACAATAAAAATGAAAATGGATGAGAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               58-535, gnl|bosTau2|chr10 (19275495-19275012)
               

               
               58-535, gnl|Hg17|chr15 (33060818-33060292)
               

               
               58-535, gnl|Mm7|chr2 (113936292-113935864)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-535, gnl|bosTau2|chr10 (19275495-19275012)
               

               
               58-535, gnl|Hg17|chr15 (33060818-33060292)
               

               
               58-535, gnl|Mm7|chr2 (113936292-113935864)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eye (0.170503)
               

               
               fco (0.157208)
               

               
               ute (0.132784)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               fco (0.157208)
               

               
               ute (0.132784)

	58-535, gnl\|bosTau2\|chr10 (19275495-19275012)
	58-535, gnl\|Hg17\|chr15 (33060818-33060292)
	58-535, gnl\|Mm7\|chr2 (113936292-113935864)