Ss1.1-Pig1-73N03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAACCATCTCATCGCAAATGCTGATGT GCAGTCCATTGCCATATCTGATCAAGAAGACAGTTTCGTGGTGGGCACGGCCGAGGGGAC AGTGTTCCATTTTCAGCTGGTCTCTGTGACTTCCAGCAGCAGTGAAAAGCAGTGGGTGCG GACGAAGCCATTTCAGCATCACACTCATGATGTGCGAGCTGTGGCCCACAGCCCCACAGC ACTGATCTCTGGAGGCACCGACACCCACTTAGTCATTCGCCCTCTCATGGAGAAGGTGGA AGTGAAGAATTATGATGCTGCTCTCCGAAAAATCACTTTTCCCCATCGACGTCTTGTTTT CTGTGCAAAAAAGAAGCAGCTTCTCCTCTTCCAGTTTGCTCATCATTTGGAACTTTGGCG ACTGGGATCCACAGTTGCAACAGGAAAGCATGGGGATACCCTTCCACTCTCTAAAAATGC AGATCATCTACTTCACCTCAAGACAAAGGGCCCTGAGAACATCATTTGCAGCTGTATCTC TCCATGTGGAAGTGGGGTAGCCTATTCTACAGCTTCTCGGTTTTTTCTCTATCGTTTGAA TTATGACCATGACAGCGTAAGCCTCCAAAGGGTTTCCAAAATGCCAGCGTTCCTTCGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAACCATCTCATCGCAAATGCTGATGT GCAGTCCATTGCCATATCTGATCAAGAAGACAGTTTCGTGGTGGGCACGGCCGAGGGGAC AGTGTTCCATTTTCAGCTGGTCTCTGTGACTTCCAGCAGCAGTGAAAAGCAGTGGGTGCG GACGAAGCCATTTCAGCATCACACTCATGATGTGCGAGCTGTGGCCCACAGCCCCACAGC ACTGATCTCTGGAGGCACCGACACCCACTTAGTCATTCGCCCTCTCATGGAGAAGGTGGA AGTGAAGAATTATGATGCTGCTCTCCGAAAAATCACTTTTCCCCATCGACGTCTTGTTTT CTGTGCAAAAAAGAAGCAGCTTCTCCTCTTCCAGTTTGCTCATCATTTGGAACTTTGGCG ACTGGGATCCACAGTTGCAACAGGAAAGCATGGGGATACCCTTCCACTCTCTAAAAATGC AGATCATCTACTTCACCTCAAGACAAAGGGCCCTGAGAACATCATTTGCAGCTGTATCTC TCCATGTGGAAGTGGGGTAGCCTATTCTACAGCTTCTCGGTTTTTTCTCTATCGTTTGAA TTATGACCATGACAGCGTAAGCCTCCAAAGGGTTTCCAAAATGCCAGCGTTCCTTCGCTC |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 68-255, gnl|bosTau2|chr18 (13974003-13973817) | |
| 68-255, gnl|canFam2|chr5 (83496884-83496686) | |
| 68-255, gnl|danRer3|chr23 (47247787-47247595) | |
| 68-255, gnl|dasNov1|scaffold_79490 (2827-3019) | |
| 68-255, gnl|echTel1|scaffold_314479 (110899-110701) | |
| 68-255, gnl|fr1|chrUn (302812085-302811892) | |
| 68-255, gnl|galGal2|chr11_random (110207-110391) | |
| 68-255, gnl|hg17|chr16 (67741920-67742118) | |
| 68-255, gnl|Hg17|chr16 (67741927-67742113) | |
| 68-255, gnl|loxAfr1|scaffold_47740 (907-735) | |
| 68-255, gnl|mm7|chr8 (105506241-105506439) | |
| 68-255, gnl|Mm7|chr8 (105506248-105506434) | |
| 68-255, gnl|monDom2|scaffold_23 (5106821-5106622) | |
| 68-255, gnl|panTro1|chr18 (62071401-62071599) | |
| 68-255, gnl|rheMac2|chr20 (67527518-67527716) | |
| 68-255, gnl|rn3|chr19 (36759841-36760039) | |
| 68-255, gnl|tetNig1|chrUn_random (74390549-74390732) | |
| 68-255, gnl|xenTro1|scaffold_132 (1479966-1479787) | |
| 344-454, gnl|bosTau2|chr18 (13972343-13972234) | |
| 344-454, gnl|Hg17|chr16 (67744985-67745094) | |
| 344-454, gnl|Mm7|chr8 (105508339-105508448) | |
| 507-633, gnl|bosTau2|chr18 (13970170-13970044) | |
| 507-633, gnl|Hg17|chr16 (67747273-67747399) | |
| 507-633, gnl|Mm7|chr8 (105512361-105512487) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-255, gnl|bosTau2|chr18 (13974003-13973817) | |
| 68-255, gnl|canFam2|chr5 (83496884-83496686) | |
| 68-255, gnl|danRer3|chr23 (47247787-47247595) | |
| 68-255, gnl|dasNov1|scaffold_79490 (2827-3019) | |
| 68-255, gnl|echTel1|scaffold_314479 (110899-110701) | |
| 68-255, gnl|fr1|chrUn (302812085-302811892) | |
| 68-255, gnl|galGal2|chr11_random (110207-110391) | |
| 68-255, gnl|hg17|chr16 (67741920-67742118) | |
| 68-255, gnl|Hg17|chr16 (67741927-67742113) | |
| 68-255, gnl|loxAfr1|scaffold_47740 (907-735) | |
| 68-255, gnl|mm7|chr8 (105506241-105506439) | |
| 68-255, gnl|Mm7|chr8 (105506248-105506434) | |
| 68-255, gnl|monDom2|scaffold_23 (5106821-5106622) | |
| 68-255, gnl|panTro1|chr18 (62071401-62071599) | |
| 68-255, gnl|rheMac2|chr20 (67527518-67527716) | |
| 68-255, gnl|rn3|chr19 (36759841-36760039) | |
| 68-255, gnl|tetNig1|chrUn_random (74390549-74390732) | |
| 68-255, gnl|xenTro1|scaffold_132 (1479966-1479787) | |
| 344-454, gnl|bosTau2|chr18 (13972343-13972234) | |
| 344-454, gnl|Hg17|chr16 (67744985-67745094) | |
| 344-454, gnl|Mm7|chr8 (105508339-105508448) | |
| 507-633, gnl|bosTau2|chr18 (13970170-13970044) | |
| 507-633, gnl|Hg17|chr16 (67747273-67747399) | |
| 507-633, gnl|Mm7|chr8 (105512361-105512487) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |