Non-Coding RNA Search

Ss1.1-Pig1-74A13.5

Sequence:


               
               GTTTGTTTCTAAGAGCTTTTCAATATTGTCTGTAATTAGCCAAAGAGAAAATCATATGAA
CTTTTTCAGTTTTAACTTTATTTTTTTTCCTTCTTACTCTGTCTTTTTCTCTGTTTTTTA
ATGGCTCAAACAAAGTTGAAGTTTTTTTTATTTAGATGAGGTATAATTGATATGTAACAT
ATTAGTTGCTGGTGTACAACAGAATTCAATATTTGTAATTTTTTCTCCAGTTTTGATTGA
TGATCATAGAGCCTCCCAAAATAGCCTCCTTAGTATCTCTGTATTTGGTAGACTCTTTTG
GAAAAGAAAAGAATCACTTGGGGAGGATAGGAGTTATAGGGAGCATCTAAATTTAAGATA
GTTTATATATTTATTCACAATTTTTTGTTTAGTCAGTATTCATTTACTACTTACTAAGTG
CTGTGTTGCTAGTATTCATCTTTGCTTTCTAATTCTCCAGCTTACTCAAAACTCACTGCT
TTATTTTTAATAGTTTAGATAAATTGACTAATTATAGTTGGCTTTCCTAAATTTTCACTT
TTTTCATTTAATTAGTTGAATCATACTAATGATTCACATTTGCATACTAACATAAATAAG
AAAGCATTAGGAAGTGACTGTTTTTAAATAGCTTTTTCTTTGTGTGTATAAATATTTTTG
AAAACATAAACATGGTTTTTTTTGCCATTTAAATGTCTTTATTTTGGGTTAGTTGTCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGTTTCTAAGAGCTTTTCAATATTGTCTGTAATTAGCCAAAGAGAAAATCATATGAA
CTTTTTCAGTTTTAACTTTATTTTTTTTCCTTCTTACTCTGTCTTTTTCTCTGTTTTTTA
ATGGCTCAAACAAAGTTGAAGTTTTTTTTATTTAGATGAGGTATAATTGATATGTAACAT
ATTAGTTGCTGGTGTACAACAGAATTCAATATTTGTAATTTTTTCTCCAGTTTTGATTGA
TGATCATAGAGCCTCCCAAAATAGCCTCCTTAGTATCTCTGTATTTGGTAGACTCTTTTG
GAAAAGAAAAGAATCACTTGGGGAGGATAGGAGTTATAGGGAGCATCTAAATTTAAGATA
GTTTATATATTTATTCACAATTTTTTGTTTAGTCAGTATTCATTTACTACTTACTAAGTG
CTGTGTTGCTAGTATTCATCTTTGCTTTCTAATTCTCCAGCTTACTCAAAACTCACTGCT
TTATTTTTAATAGTTTAGATAAATTGACTAATTATAGTTGGCTTTCCTAAATTTTCACTT
TTTTCATTTAATTAGTTGAATCATACTAATGATTCACATTTGCATACTAACATAAATAAG
AAAGCATTAGGAAGTGACTGTTTTTAAATAGCTTTTTCTTTGTGTGTATAAATATTTTTG
AAAACATAAACATGGTTTTTTTTGCCATTTAAATGTCTTTATTTTGGGTTAGTTGTCACT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-224, gnl|bosTau2|chr2 (7918706-7918487)
               


               
               255-720, gnl|bosTau2|chr2 (7917532-7917071)
               

               
               255-720, gnl|Hg17|chr2 (179205719-179206263)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-224, gnl|bosTau2|chr2 (7918706-7918487)
               


               
               255-720, gnl|bosTau2|chr2 (7917532-7917071)
               

               
               255-720, gnl|Hg17|chr2 (179205719-179206263)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               liv (0.146284)
               

               
               nmm (0.132802)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               nmm (0.132802)
               

               
               ret (0.128733)

	5-224, gnl\|bosTau2\|chr2 (7918706-7918487)

	255-720, gnl\|bosTau2\|chr2 (7917532-7917071)
	255-720, gnl\|Hg17\|chr2 (179205719-179206263)