Non-Coding RNA Search

Ss1.1-Pig1-74B07.5

Sequence:


               
               GGCTGCACTTGAAGGACACTAGAGCGTCTTAGAATAAGAAAGTGCAAAAGGCACTTGCAA
GGGTGGGCTGAGGGGTGGTAGAATGGAACCCATCCTTTAACACATAAAGACCCTCAAACT
GATTTCAGAACCAGCCTAGTGTTCCAAAAGCAGAAGGGTCATAGTTTTCACTAAGAGCCT
CGGAAATCCGCAAGCAAATCCCCCAGGGGGATTTTAGCGGAGCCTCAGTGACAGCTGTCA
GGAGAGCAGTAGTTCCCGTCTGTGCAAATATTCCAGAGAGTTGAGGCGTTTAGAAAGCAC
TGGTTCTTTCAAGAGCAGGTAGTGTGATTGTTTGCAATCCTGGGCCAAGATGCGGAAACA
AATCAGAAGGGAGAGGATAATAACATTAAATGGCGCCCTCAACACACTGCGCAAGAAACC
TCAAATAGTTCAGCTACTTCAGGAAGCTCTGAACACAGCCCCCCCTCCCCCTTCTCTTCC
CAGTCTAGAGCTGGCCTCGCCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGCACTTGAAGGACACTAGAGCGTCTTAGAATAAGAAAGTGCAAAAGGCACTTGCAA
GGGTGGGCTGAGGGGTGGTAGAATGGAACCCATCCTTTAACACATAAAGACCCTCAAACT
GATTTCAGAACCAGCCTAGTGTTCCAAAAGCAGAAGGGTCATAGTTTTCACTAAGAGCCT
CGGAAATCCGCAAGCAAATCCCCCAGGGGGATTTTAGCGGAGCCTCAGTGACAGCTGTCA
GGAGAGCAGTAGTTCCCGTCTGTGCAAATATTCCAGAGAGTTGAGGCGTTTAGAAAGCAC
TGGTTCTTTCAAGAGCAGGTAGTGTGATTGTTTGCAATCCTGGGCCAAGATGCGGAAACA
AATCAGAAGGGAGAGGATAATAACATTAAATGGCGCCCTCAACACACTGCGCAAGAAACC
TCAAATAGTTCAGCTACTTCAGGAAGCTCTGAACACAGCCCCCCCTCCCCCTTCTCTTCC
CAGTCTAGAGCTGGCCTCGCCTAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               104-287, - strand, RNAz p=0.974511

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               104-287, - strand, RNAz p=0.974511

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-480, gnl|bosTau2|chr14 (18460576-18460077)
               

               
               1-480, gnl|Hg17|chr8 (65454356-65454847)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr14 (18460576-18460077)
               

               
               1-480, gnl|Hg17|chr8 (65454356-65454847)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	1-480, gnl\|bosTau2\|chr14 (18460576-18460077)
	1-480, gnl\|Hg17\|chr8 (65454356-65454847)