Ss1.1-Pig1-75C11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCCTGGCTTCGCGGAGGTGCTGGGCTTCGTCATGCCGCTGGACCTGGGGGCTAAGGGCA GCTGCCACATTGGGGGCAACGTGGCGACCAACGCGGGTGGCCTGCGGTTTCTGCGATACG GCTCACTGCGCGGGACTGTCTTGGGCCTGGAAGTGGTACTGGCCGACGGCACCCTCCTGA ACTGCCTGACGTCACTGCGGAAGGACAACACGGGCTATGACCTGAAGCAGCTCTTCATCG GCTCAGAGGGCACCCTGGGGGTCATCACCGCTGTGTCCATCCTGTGTCCGCCCAAGCCCA GCGCCGTGAACGTGGCCTTCCTTGGTTGTCCTGGCTTCGCGGAGGTGCTGCAGACCTTCA GCACCGGCAGGAGGCTGCTGGGCGAGATCCTGTCGGCGTTCGAGTTCATGGACGCCGAGT GCCTGCAGCTGGTCGGGCGCCACCTGCATCTCACCAACCCCGTGCAAGAAAGTCCATTCT ATGTTCTCATCGAGACCTCGGGCTCTGGAGCAGATCACGATGCTGAGAAGCTGAGCAGCT TCCTGGAGCAGGTCCAGGGCTCCGGGCTGGTGACCGACGGGACCCTGGCCACCGATCAGA GGAGAATCCAGGCGCTATGGGCCCTGCGGGAGAGGATCTCAGAGGCCCTGAGCCACGACG GCTACGTGTACAAATACGACCTGTCCCTGCCCCTGGACCGGCTCTACGACCTTGTGGACG ATCTGCGTGCCCGCCTCGGCCCGAGTGCAAAGCACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCCTGGCTTCGCGGAGGTGCTGGGCTTCGTCATGCCGCTGGACCTGGGGGCTAAGGGCA GCTGCCACATTGGGGGCAACGTGGCGACCAACGCGGGTGGCCTGCGGTTTCTGCGATACG GCTCACTGCGCGGGACTGTCTTGGGCCTGGAAGTGGTACTGGCCGACGGCACCCTCCTGA ACTGCCTGACGTCACTGCGGAAGGACAACACGGGCTATGACCTGAAGCAGCTCTTCATCG GCTCAGAGGGCACCCTGGGGGTCATCACCGCTGTGTCCATCCTGTGTCCGCCCAAGCCCA GCGCCGTGAACGTGGCCTTCCTTGGTTGTCCTGGCTTCGCGGAGGTGCTGCAGACCTTCA GCACCGGCAGGAGGCTGCTGGGCGAGATCCTGTCGGCGTTCGAGTTCATGGACGCCGAGT GCCTGCAGCTGGTCGGGCGCCACCTGCATCTCACCAACCCCGTGCAAGAAAGTCCATTCT ATGTTCTCATCGAGACCTCGGGCTCTGGAGCAGATCACGATGCTGAGAAGCTGAGCAGCT TCCTGGAGCAGGTCCAGGGCTCCGGGCTGGTGACCGACGGGACCCTGGCCACCGATCAGA GGAGAATCCAGGCGCTATGGGCCCTGCGGGAGAGGATCTCAGAGGCCCTGAGCCACGACG GCTACGTGTACAAATACGACCTGTCCCTGCCCCTGGACCGGCTCTACGACCTTGTGGACG ATCTGCGTGCCCGCCTCGGCCCGAGTGCAAAGCACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 155-326, gnl|bosTau2|chr14 (8188243-8188414) | |
| 155-326, gnl|canFam2|chr25 (54500039-54500215) | |
| 155-326, gnl|canFam2|chr25 (54500039-54500215) | |
| 155-326, gnl|danRer3|chrNA (166776332-166776160) | |
| 155-326, gnl|danRer3|chrNA (166776332-166776160) | |
| 155-326, gnl|fr1|chrUn (249570225-249570033) | |
| 155-326, gnl|fr1|chrUn (249570225-249570033) | |
| 155-326, gnl|galGal2|chr9 (8842152-8842327) | |
| 155-326, gnl|galGal2|chr9 (8842152-8842327) | |
| 155-326, gnl|hg17|chr2 (242404113-242404302) | |
| 155-326, gnl|Hg17|chr2 (242404113-242404284) | |
| 155-326, gnl|hg17|chr2_random (393854-394043) | |
| 155-326, gnl|monDom2|scaffold_162 (1434077-1433901) | |
| 155-326, gnl|monDom2|scaffold_162 (1434077-1433901) | |
| 155-326, gnl|oryCun1|scaffold_144855 (4014-3825) | |
| 155-326, gnl|oryCun1|scaffold_144855 (4014-3825) | |
| 155-326, gnl|panTro1|chr13 (133885676-133885865) | |
| 155-326, gnl|panTro1|chr13 (133885676-133885865) | |
| 155-326, gnl|rheMac2|chr12 (105666524-105666713) | |
| 155-326, gnl|rheMac2|chr12 (105666524-105666713) | |
| 155-326, gnl|rn3|chr9 (93315084-93315270) | |
| 155-326, gnl|rn3|chr9 (93315084-93315270) | |
| 155-326, gnl|tetNig1|chr10 (8494763-8494573) | |
| 155-326, gnl|tetNig1|chr10 (8494763-8494573) | |
| 155-326, gnl|xenTro1|scaffold_209 (1561283-1561473) | |
| 155-326, gnl|xenTro1|scaffold_209 (1561283-1561473) | |
| 607-756, gnl|bosTau2|chr14 (8193544-8193693) | |
| 607-756, gnl|Hg17|chr2 (242415249-242415398) | |
| 607-756, gnl|Mm7|chrUn_random (744522-744668) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 155-326, gnl|bosTau2|chr14 (8188243-8188414) | |
| 155-326, gnl|canFam2|chr25 (54500039-54500215) | |
| 155-326, gnl|canFam2|chr25 (54500039-54500215) | |
| 155-326, gnl|danRer3|chrNA (166776332-166776160) | |
| 155-326, gnl|danRer3|chrNA (166776332-166776160) | |
| 155-326, gnl|fr1|chrUn (249570225-249570033) | |
| 155-326, gnl|fr1|chrUn (249570225-249570033) | |
| 155-326, gnl|galGal2|chr9 (8842152-8842327) | |
| 155-326, gnl|galGal2|chr9 (8842152-8842327) | |
| 155-326, gnl|hg17|chr2 (242404113-242404302) | |
| 155-326, gnl|Hg17|chr2 (242404113-242404284) | |
| 155-326, gnl|hg17|chr2_random (393854-394043) | |
| 155-326, gnl|monDom2|scaffold_162 (1434077-1433901) | |
| 155-326, gnl|monDom2|scaffold_162 (1434077-1433901) | |
| 155-326, gnl|oryCun1|scaffold_144855 (4014-3825) | |
| 155-326, gnl|oryCun1|scaffold_144855 (4014-3825) | |
| 155-326, gnl|panTro1|chr13 (133885676-133885865) | |
| 155-326, gnl|panTro1|chr13 (133885676-133885865) | |
| 155-326, gnl|rheMac2|chr12 (105666524-105666713) | |
| 155-326, gnl|rheMac2|chr12 (105666524-105666713) | |
| 155-326, gnl|rn3|chr9 (93315084-93315270) | |
| 155-326, gnl|rn3|chr9 (93315084-93315270) | |
| 155-326, gnl|tetNig1|chr10 (8494763-8494573) | |
| 155-326, gnl|tetNig1|chr10 (8494763-8494573) | |
| 155-326, gnl|xenTro1|scaffold_209 (1561283-1561473) | |
| 155-326, gnl|xenTro1|scaffold_209 (1561283-1561473) | |
| 607-756, gnl|bosTau2|chr14 (8193544-8193693) | |
| 607-756, gnl|Hg17|chr2 (242415249-242415398) | |
| 607-756, gnl|Mm7|chrUn_random (744522-744668) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) |