Non-Coding RNA Search

Ss1.1-Pig1-77A11.5

Sequence:


               
               GCTGCAGCTCTCGACGGCAATGGGGGGCCTGCTGGGCGCCTGCTTCGCCATCTGTACACA
GTCCCCCAAGGGAGTAGAGGAGACAGTAGCCTGGATCCTGCCCTTCACCTCTGGTGGCTT
TCTCTACATCGCCCTGGTGAACGTGCTGCCTGACCTCTTGGAGGAAGACGATCCGTGGCA
CTCCCTGCAGCAAGTGCTTCTGCTCTGCACGGGCATCGTAGTGATGGTGCTGTTTTCTCT
CTTCGTTGAGTAACCATCCCTGACACCCCACCCCCTGCAGCAATAAGAGACTCGGATTCA
TTCTGTGACTGTGTGTGTGTGTGAGGCANACAGCAAGCGAACAAGCCTCCTACCAAANAA
GAGGCTGGTGTGTGTGCGTGTGAGAGAGAGACCGACACTGTGACTCCTCGTGTGCTGGCC
CTGGGGCCTGAAGCCCACGCCTGCCCCCAGCCACCCTGTGGTCTCTCCTTGCTACCCTGC
CGTCTTGCGCCTCCTGGAGTTGGCAATGAGGAGCANGAGCCATGGGGCCTCCCCACACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCAGCTCTCGACGGCAATGGGGGGCCTGCTGGGCGCCTGCTTCGCCATCTGTACACA
GTCCCCCAAGGGAGTAGAGGAGACAGTAGCCTGGATCCTGCCCTTCACCTCTGGTGGCTT
TCTCTACATCGCCCTGGTGAACGTGCTGCCTGACCTCTTGGAGGAAGACGATCCGTGGCA
CTCCCTGCAGCAAGTGCTTCTGCTCTGCACGGGCATCGTAGTGATGGTGCTGTTTTCTCT
CTTCGTTGAGTAACCATCCCTGACACCCCACCCCCTGCAGCAATAAGAGACTCGGATTCA
TTCTGTGACTGTGTGTGTGTGTGAGGCANACAGCAAGCGAACAAGCCTCCTACCAAANAA
GAGGCTGGTGTGTGTGCGTGTGAGAGAGAGACCGACACTGTGACTCCTCGTGTGCTGGCC
CTGGGGCCTGAAGCCCACGCCTGCCCCCAGCCACCCTGTGGTCTCTCCTTGCTACCCTGC
CGTCTTGCGCCTCCTGGAGTTGGCAATGAGGAGCANGAGCCATGGGGCCTCCCCACACCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|52545572|emb|CAH56389.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|52545572|emb|CAH56389.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               177-519, gnl|bosTau2|chr15 (48897948-48897602)
               

               
               177-519, gnl|Hg17|chr11 (47393414-47393802)
               

               
               177-519, gnl|Mm7|chr2 (90913695-90913378)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               177-519, gnl|bosTau2|chr15 (48897948-48897602)
               

               
               177-519, gnl|Hg17|chr11 (47393414-47393802)
               

               
               177-519, gnl|Mm7|chr2 (90913695-90913378)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.20816)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)

	177-519, gnl\|bosTau2\|chr15 (48897948-48897602)
	177-519, gnl\|Hg17\|chr11 (47393414-47393802)
	177-519, gnl\|Mm7\|chr2 (90913695-90913378)