Ss1.1-Pig1-77I20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACCGGAGAGGGTGGGGTCCGCGGACTGTTGGCTGCCAGGCTGGAAATCCGCCCCGGGCC CTAGAGGTTGCGGGAGAGACCTGTGGACGGGGTGAACCTGTCTGCAGGTTCCCACATCAG GGCTGGAAGGAGCCCACGAGTTACCCAGAGATCTGTGGGAACTGCCCCGTGACTGTTGGA GAAGATGCCGTACCTTGGCTCGGAGGATGTGGTGAAGGAGCTGAAGAAGGCTCTGTGTAA CCCTCACATACAGGCTGATAGGCTGCGCTATCGGAATGTCATCCAGCGCGTGATTAGGCA CATGACTCAGGGCTTGGACATGTCTGGTGTTTTCATGGAAATGGTGAAGGCCAGTGCCAC TGTAGATATTGTTCAGAAGAAGTTGGTTTATCTGTACATGTGTACCTATGCCCCCCTGAA ACCAGATCTGGCTCTCCTGGCCATCAATACCCTGTGCAAAGACTGTTCGGACCCCAACCC AATGGTGCGAGGGCTGGCGCTACGGAGCATGTGTAGCCTCAGGATGCCTGGCGTGCAGGA ATATATCCAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGAAGAGT CGCAGTGCTTGGTTGTGCCAAGATGCATAATCTTCAAGGAGACTCTGAAGTGGATGGTGC CCTAGTAAATGAATTATATAGTTTGCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTG CCTGAGGTCTCTCGAGGAAATCCTGAAGCAGGAAGGAGGTGTTGTCATCAATAAGCCCAT CGCCCACCATCTCTTAAATCGGTTTGGATGTCCCTGTGCTCTTTTTGTCATGATCAGATT TGCATATTAGTGGGATCTTTTCGATGTGTTAATTTGAGGAGAGGTCTTGAATCTGGATCT GTGCTACAGTGATCATATCTTTGACCTTAGACAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACCGGAGAGGGTGGGGTCCGCGGACTGTTGGCTGCCAGGCTGGAAATCCGCCCCGGGCC CTAGAGGTTGCGGGAGAGACCTGTGGACGGGGTGAACCTGTCTGCAGGTTCCCACATCAG GGCTGGAAGGAGCCCACGAGTTACCCAGAGATCTGTGGGAACTGCCCCGTGACTGTTGGA GAAGATGCCGTACCTTGGCTCGGAGGATGTGGTGAAGGAGCTGAAGAAGGCTCTGTGTAA CCCTCACATACAGGCTGATAGGCTGCGCTATCGGAATGTCATCCAGCGCGTGATTAGGCA CATGACTCAGGGCTTGGACATGTCTGGTGTTTTCATGGAAATGGTGAAGGCCAGTGCCAC TGTAGATATTGTTCAGAAGAAGTTGGTTTATCTGTACATGTGTACCTATGCCCCCCTGAA ACCAGATCTGGCTCTCCTGGCCATCAATACCCTGTGCAAAGACTGTTCGGACCCCAACCC AATGGTGCGAGGGCTGGCGCTACGGAGCATGTGTAGCCTCAGGATGCCTGGCGTGCAGGA ATATATCCAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGAAGAGT CGCAGTGCTTGGTTGTGCCAAGATGCATAATCTTCAAGGAGACTCTGAAGTGGATGGTGC CCTAGTAAATGAATTATATAGTTTGCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTG CCTGAGGTCTCTCGAGGAAATCCTGAAGCAGGAAGGAGGTGTTGTCATCAATAAGCCCAT CGCCCACCATCTCTTAAATCGGTTTGGATGTCCCTGTGCTCTTTTTGTCATGATCAGATT TGCATATTAGTGGGATCTTTTCGATGTGTTAATTTGAGGAGAGGTCTTGAATCTGGATCT GTGCTACAGTGATCATATCTTTGACCTTAGACAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-112, gnl|bosTau2|chr3 (24380720-24380829) | |
| 2-112, gnl|Hg17|chr1 (114159717-114159608) | |
| 2-112, gnl|Mm7|chr3 (103603609-103603726) | |
| 296-523, gnl|bosTau2|chr3 (24382825-24383052) | |
| 296-523, gnl|canFam2|chr17 (54784615-54784846) | |
| 296-523, gnl|danRer3|chr23 (367940-367711) | |
| 296-523, gnl|dasNov1|scaffold_10825 (986-762) | |
| 296-523, gnl|echTel1|scaffold_306679 (8567-8798) | |
| 296-523, gnl|fr1|chrUn (211291119-211291348) | |
| 296-523, gnl|galGal2|chr26 (2332564-2332794) | |
| 296-523, gnl|hg17|chr1 (114157300-114157531) | |
| 296-523, gnl|Hg17|chr1 (114157528-114157301) | |
| 296-523, gnl|loxAfr1|scaffold_1119 (77988-78218) | |
| 296-523, gnl|mm7|chr3 (103606297-103606066) | |
| 296-523, gnl|Mm7|chr3 (103606067-103606294) | |
| 296-523, gnl|monDom2|scaffold_0 (1135048-1134817) | |
| 296-523, gnl|oryCun1|scaffold_207979 (41922-42153) | |
| 296-523, gnl|panTro1|chr1 (113945752-113945983) | |
| 296-523, gnl|rheMac2|chr1 (116898540-116898771) | |
| 296-523, gnl|rn3|chr2 (198999808-198999577) | |
| 296-523, gnl|tetNig1|chrUn_random (128902156-128902387) | |
| 296-523, gnl|xenTro1|scaffold_11 (1154285-1154054) | |
| 650-891, gnl|bosTau2|chr3 (24384149-24384399) | |
| 650-891, gnl|Hg17|chr1 (114156051-114155831) | |
| 650-891, gnl|Mm7|chr3 (103607240-103607461) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-112, gnl|bosTau2|chr3 (24380720-24380829) | |
| 2-112, gnl|Hg17|chr1 (114159717-114159608) | |
| 2-112, gnl|Mm7|chr3 (103603609-103603726) | |
| 296-523, gnl|bosTau2|chr3 (24382825-24383052) | |
| 296-523, gnl|canFam2|chr17 (54784615-54784846) | |
| 296-523, gnl|danRer3|chr23 (367940-367711) | |
| 296-523, gnl|dasNov1|scaffold_10825 (986-762) | |
| 296-523, gnl|echTel1|scaffold_306679 (8567-8798) | |
| 296-523, gnl|fr1|chrUn (211291119-211291348) | |
| 296-523, gnl|galGal2|chr26 (2332564-2332794) | |
| 296-523, gnl|hg17|chr1 (114157300-114157531) | |
| 296-523, gnl|Hg17|chr1 (114157528-114157301) | |
| 296-523, gnl|loxAfr1|scaffold_1119 (77988-78218) | |
| 296-523, gnl|mm7|chr3 (103606297-103606066) | |
| 296-523, gnl|Mm7|chr3 (103606067-103606294) | |
| 296-523, gnl|monDom2|scaffold_0 (1135048-1134817) | |
| 296-523, gnl|oryCun1|scaffold_207979 (41922-42153) | |
| 296-523, gnl|panTro1|chr1 (113945752-113945983) | |
| 296-523, gnl|rheMac2|chr1 (116898540-116898771) | |
| 296-523, gnl|rn3|chr2 (198999808-198999577) | |
| 296-523, gnl|tetNig1|chrUn_random (128902156-128902387) | |
| 296-523, gnl|xenTro1|scaffold_11 (1154285-1154054) | |
| 650-891, gnl|bosTau2|chr3 (24384149-24384399) | |
| 650-891, gnl|Hg17|chr1 (114156051-114155831) | |
| 650-891, gnl|Mm7|chr3 (103607240-103607461) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |